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scnpilot_solids2_trim150_scaffold_885_14

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: comp(11242..11838)

Top 3 Functional Annotations

Value Algorithm Source
Site-specific recombinase, DNA invertase Pin n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0MCF1_ARTPP similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 198.0
  • Bit_score: 317
  • Evalue 1.20e-83
  • rbh
Putative site-specific recombinase {ECO:0000313|EMBL:CEG88327.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 198.0
  • Bit_score: 358
  • Evalue 6.70e-96
site-specific recombinase, DNA invertase Pin similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 198.0
  • Bit_score: 317
  • Evalue 3.80e-84
  • rbh

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Taxonomy

Propionibacterium freudenreichii → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 597
GTGAGACATCTCGGGTACACACGGGTCAGCACCAGAAGCCAAGACGCGAAACTGCAAGTCGATGCGCTCGTCAAGTCCGGCGTCCAAGAGCGGGACATTTTTGCCGACGTCACCTCGGGCAGCCGGACCGCGATCTCGCGCCCAGGGATGAAGAAGCTCCTCGAGTACACCAAGCCCGGCGACACCGTCGTCGTCTGGCGGGTCGATCGGCTTGGACGGTCCCTGATCGATGTGCTCAACACGGTGAAGCTGCTCCGAGAGCAGGACGTGCAGGTGAAAAGCATCTCGGATGGGATCGACCCCTCGACGACCTCGGGCCGGTTGATGTTGAACATGCTCGCCACTTTGGCCGAGTACGAACGCGAACTGATCACAGAACGCGTCAACGCCGGGATCACCGCAGCCCGGCAAGGCGGAACCAAGTTCGGCCGGCCCCTGTCAGATCCCGTCGTCGTTGCTGACAAGCTCAAGCTCGTCGCCGAGGCCAGGGCGAAAGGCCGCACGGCGAAGGAGGCGGCGAAACTCGTTGGGTGGAGCCGGGCGACTCTGTACCGTCACCAACAGGCCCTCGCGGCTCGCGAGAGCGCCACCGTGTAG
PROTEIN sequence
Length: 199
VRHLGYTRVSTRSQDAKLQVDALVKSGVQERDIFADVTSGSRTAISRPGMKKLLEYTKPGDTVVVWRVDRLGRSLIDVLNTVKLLREQDVQVKSISDGIDPSTTSGRLMLNMLATLAEYERELITERVNAGITAARQGGTKFGRPLSDPVVVADKLKLVAEARAKGRTAKEAAKLVGWSRATLYRHQQALAARESATV*