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scnpilot_solids2_trim150_scaffold_1893_10

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: comp(9524..11257)

Top 3 Functional Annotations

Value Algorithm Source
Putative oligopeptide ABC transporter,solute-binding protein n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DTF4_9NOCA similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 562.0
  • Bit_score: 562
  • Evalue 4.80e-157
  • rbh
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:EWT07691.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.9
  • Coverage: 530.0
  • Bit_score: 613
  • Evalue 3.40e-172
D,D-dipeptide-binding periplasmic protein ddpA similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 562.0
  • Bit_score: 560
  • Evalue 5.80e-157

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Taxonomy

Intrasporangium chromatireducens → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1734
GTGCACAAGTCCGCCAAACTGACCCTCATCACGGCGTTGGGGGTGTCTGTTGCGATGGTGGTCGCGGCCTGTGGCTCGGGCCGCACCGACAACACCACCACCAGCTCGCAGCCGTCGGAGAGCTCCTCGTCTCAGGAGAGCAGCGCCCCCGCCGATTCCGGTGAGAGCAGCGCGACCAGCTCCGCGGCCGGCGACACGGGCTCCGCCGGCAGCGGTGCCACCATTGCGATCGGCACCACGGACAAGGTCGTCTCCCTCGACCCGGCCGGGTCCTACGACAACGGCTCGCTGATGCTGGAGCTGCAGCTCTACCAGTTCCTCATGAACATCCCGGCTGGCCAGAGCACGCCGACCCCGGACGCGGCCCAGAGCTGCGATTTCACCGACAACGGCGCGACCTACACCTGCAAGATGAAGGAAGGTCTCACCTTCTCCAACGGCGATCCGCTCACCGCCAAGGACGTGGCCTTCTCGTTCCAGCGCGTCGTGGACATCAACGACCCGAACGGCCCGGCGTCACTGCTCGGCAACATGAAGTCCGTCGCGGCGCCGGACGACTCGACCGTCGTCTTCACGCTGGTGAACGCCAACGACCAAACCTGGCCGTTCGTGCTGGGCACCTCCGCCGGCCCGATCGTGGACTCGAAGGTCTACCCGGCCGACAAGCTGCTGTCCGACGAGCAGGCCGTCGGGTCCGGCCCGTACAAGCTCGATTCGTACTCGAAGAACGAACTGGTCTCGTTGGTGCCGAACGCCAGCTACAACGGCAACGGCGGCGACGTGAAGAACGCCGGTGTCACGCTGCAGTACTTCACCGACGCCTCCAACCTGAAGCTCGCCGTGCAGCAGGGTGACGTGGACGTGGCCTGGCGCACGCTGGACCCGCAGTCCATCACGGACCTCAAGTCCAACGACAAGGTCAAGGTGCTCGAGGGCCCGGGCGGCGAGGACCGCTACATCGTGTTCAACCTGAAGACCATGCCGGGCGACAACGATGCCCAGAAGCTGGCCATCCGCCGCGCGATCGCCTACTCGGTCGACCGCCAGGCGCTCGCCACGAAGGTGTTCCAGGACCAGTATCAGCCGGCCTACTCCATGGTCCCGGACGGCTTCCCCGGTCACGTGGACGCCTTCAAGGACGAGTTCGGCGACGCCCCGAACAAGGATGCAGCCGCCAAGGCCCTGTCCGATGCGGGCGTGACCACCCCGGTGACGCTGCCCATCGAATACAACCCGGATCACTACGGCTCGGCCTCGGATCTCCAGTTCAACGAGATCAAGTCCCAGCTCGAGGCGACCGGCCTGTTCAAGGTGAACCTGCAGTCCTCGGAGTGGACGACGTACTCCAAGGAGCGCACCCAGGACGCCTACCCGATCTACCAGCTCGGCTGGTACCCGGACTTCCCGGATGCGGACAACTACCTGACGCCGTTCCTGGCTCCGAACAACTTCGTGCAGGCCCACTACTGTGACGCCGACGCCGCGGAGGGTTCGCGCCCCTGCGACACCGACGGCGTGCTGCCGCTGCTGACGACCGAGCAGACCCAGTCGGGCGACGCCCGCATCAGCGCGATCGAGCAGATCCAGCAGATCTCGGCGACCGGCGTCATGCCGACGCTGCCGCTGCTGCAGGGCAAGCAGATCGCCGTGACGGGAACCGACGTCACCGGTGTCCAGGACACCCTGGACGCGACGTTCCTGTTCCGCTTCTGGATGATCGGCAAGAACTCCTGA
PROTEIN sequence
Length: 578
VHKSAKLTLITALGVSVAMVVAACGSGRTDNTTTSSQPSESSSSQESSAPADSGESSATSSAAGDTGSAGSGATIAIGTTDKVVSLDPAGSYDNGSLMLELQLYQFLMNIPAGQSTPTPDAAQSCDFTDNGATYTCKMKEGLTFSNGDPLTAKDVAFSFQRVVDINDPNGPASLLGNMKSVAAPDDSTVVFTLVNANDQTWPFVLGTSAGPIVDSKVYPADKLLSDEQAVGSGPYKLDSYSKNELVSLVPNASYNGNGGDVKNAGVTLQYFTDASNLKLAVQQGDVDVAWRTLDPQSITDLKSNDKVKVLEGPGGEDRYIVFNLKTMPGDNDAQKLAIRRAIAYSVDRQALATKVFQDQYQPAYSMVPDGFPGHVDAFKDEFGDAPNKDAAAKALSDAGVTTPVTLPIEYNPDHYGSASDLQFNEIKSQLEATGLFKVNLQSSEWTTYSKERTQDAYPIYQLGWYPDFPDADNYLTPFLAPNNFVQAHYCDADAAEGSRPCDTDGVLPLLTTEQTQSGDARISAIEQIQQISATGVMPTLPLLQGKQIAVTGTDVTGVQDTLDATFLFRFWMIGKNS*