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scnpilot_solids2_trim150_scaffold_2638_12

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: 5963..6256

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S17 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCH4_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 107.0
  • Bit_score: 148
  • Evalue 4.80e-33
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 107.0
  • Bit_score: 148
  • Evalue 1.50e-33
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 107.0
  • Bit_score: 148
  • Evalue 6.80e-33

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 294
GTGAGCGAGCAGAACGGCACCGTCGAGCCGGCGGCCGGCGAGGTCCGCGGGTTCCGCAAGACCCGCGAGGGCATCGTCGTTTCCGACAAGATGCAGAAGACGATCGTGGTCGCCATCGAGGACCGGGTCAAGCACCCGCGGTACTCCAAGGTCATCCGTCGTACCCAGAAGGTCAAGGCGCACGACGAGTCCGGGCTGGCCGGCGTGGGCGACCGGGTGCTGCTGGCCGAGACCAGGCCGCTGTCGGCGACCAAGCGCTGGCGCCTGGCCGAGGTCTTGGAGAAGGCCAAGTAA
PROTEIN sequence
Length: 98
VSEQNGTVEPAAGEVRGFRKTREGIVVSDKMQKTIVVAIEDRVKHPRYSKVIRRTQKVKAHDESGLAGVGDRVLLAETRPLSATKRWRLAEVLEKAK*