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scnpilot_solids2_trim150_scaffold_5088_2

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: comp(1327..2169)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase n=1 Tax=Rhodococcus rhodochrous RepID=UPI00035C0AC1 similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 279.0
  • Bit_score: 313
  • Evalue 1.90e-82
  • rbh
Pseudouridylate synthase {ECO:0000313|EMBL:EHK84401.1}; TaxID=1114960 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans AK37.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 279.0
  • Bit_score: 313
  • Evalue 3.50e-82
ribosomal pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 282.0
  • Bit_score: 306
  • Evalue 9.60e-81
  • rbh

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Taxonomy

Rhodococcus pyridinivorans → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 843
ATGCCGACCGACGGCGCATTCACGACCGTGGCCGAATTCCTCGCGGACAAGACCCATGGCGCCGCCGAGGTGCAGCGCCGACTGGACGCCGGCGGGATCGTGCTCACCGACGGCACCGTCGTCACCCGATCGACGCCCTACCTGCCCGGCAGATGGGCATTCCTGTATCGCGACGCGCTGCCGGAGGCCGCGGTCCCCGGCGACATCGCCGTGCTCTACCGCGACGAGAACATCGTCGTCGTGGACAAGCCGCACTTCCTGGCGACCATGCCGCGCGGGTCGCACGTGACGCAGACCGCGGTGGTTCGGCTGCGCCGCGAGCTGGGCCTTGCCGAGCTGACCGCGGCGCACCGGCTGGACCGGCTCACCGCCGGCGTGCTGCTGCTCACCGTGCGCCGCGAGGTGCGGGCGGCCTACCAGGACATGTTCGCCCGGCGGGAGGTGCACAAGACCTACCAGGCGCTCGCGCCCCGCCGTGACGACCTGGCGCTGCCCGTCGAGGTGCGGTCTCGCATCGTCAAGGAGCGTGGGAGCCTGCAGGTCCGTGAGGTCCCCGGCGAGCCGAACGCGATCACCCGGGTGGAGCGGTGCGAGCCGGTGGGTCACGGACTGGGCCGCTACCTGCTCACCCCGCTCACCGGGCGGACCCACCAGCTGCGGGTGCACCTGGCCGGTCTCGGCATCCCGATCGTGGGCGACCCGCTGTACCCGGAGGTGCTCGAACACCGGCCGGACGACTTCAGCACCCCGCTGCAACTGCTCGCGCGCACGCTCGAGTTCACCGACCCGCTGACCGGCGAGCCGCGGCGCTTCGCATCCCGCCGCAGTCTGACCCCGACCTGA
PROTEIN sequence
Length: 281
MPTDGAFTTVAEFLADKTHGAAEVQRRLDAGGIVLTDGTVVTRSTPYLPGRWAFLYRDALPEAAVPGDIAVLYRDENIVVVDKPHFLATMPRGSHVTQTAVVRLRRELGLAELTAAHRLDRLTAGVLLLTVRREVRAAYQDMFARREVHKTYQALAPRRDDLALPVEVRSRIVKERGSLQVREVPGEPNAITRVERCEPVGHGLGRYLLTPLTGRTHQLRVHLAGLGIPIVGDPLYPEVLEHRPDDFSTPLQLLARTLEFTDPLTGEPRRFASRRSLTPT*