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scnpilot_solids2_trim150_scaffold_3608_2

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: comp(829..1098)

Top 3 Functional Annotations

Value Algorithm Source
ROK family transcriptional regulator n=1 Tax=Amycolatopsis balhimycina RepID=UPI00036A517C similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 81.0
  • Bit_score: 77
  • Evalue 9.60e-12
ROK family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 80.0
  • Bit_score: 76
  • Evalue 6.70e-12
ROK family transcriptional regulator {ECO:0000313|EMBL:AEK41524.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 80.0
  • Bit_score: 76
  • Evalue 3.00e-11

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Taxonomy

Amycolatopsis mediterranei → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGTCGAACGGGACGGCCGACCGCGACTCCGCCGTGCTCGAACTGCTCCGCGTGCGCAGCGCGACCAGGCCGCAGATCGCCGAGGCGACCGGGATGAGCAAGCCGACCATCTCGGCGGCCATCGCGGCGCTGGAGCAGGCGGGCCTGGTGCAGGAGGACGGGCAGATCGTGGGCGCGACCGGTCGCAGCCCGGTGGTCTACCGCCTGAACGCCACCGCTCGTCTGGTTGCCGGCATCGATGTGGGCGGAGTCAATACCCGCGCCGGCTGA
PROTEIN sequence
Length: 90
MSNGTADRDSAVLELLRVRSATRPQIAEATGMSKPTISAAIAALEQAGLVQEDGQIVGATGRSPVVYRLNATARLVAGIDVGGVNTRAG*