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scnpilot_solids2_trim150_scaffold_4858_5

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: comp(4240..4929)

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237B711 similarity UNIREF
DB: UNIREF100
  • Identity: 40.8
  • Coverage: 201.0
  • Bit_score: 131
  • Evalue 1.10e-27
Nitrate/nitrite response regulator protein {ECO:0000313|EMBL:EWC60997.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.4
  • Coverage: 219.0
  • Bit_score: 150
  • Evalue 2.40e-33
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.1
  • Coverage: 207.0
  • Bit_score: 125
  • Evalue 1.90e-26

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Taxonomy

Actinokineospora spheciospongiae → Actinokineospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGGAGCAGGCTTATGCGATCGTCATTGCGGACATCGACGTCCTGACAGTCGAGTATGTCTCGGACCTGTTGGAACGTCACGGATTTCGCGTGCGCATCGCGCCTCCGGTACACGCGGCCGTGGGCGACTGGATCCACCGCTACGGTGCGGACCTGTGCCTGCTGGACATCGCGCTGCGGGACGGCGCGGACGTCACCGACATTGCATGGCTGCACAGTGAGCATCCCGAAACGAAGATCGTCATCCGCACCGCGAATACCTCGCCGGAGACGATGCGGGACGCACTGGCCGCCGGCGCATCAGGATATGTGCACAAGTCCCGGGGGCCCGTCATCCTCATCGAGGCGCTCCGCAGGGTTCTGGAAGGCGAAATCGTGGTGGAGGGATCCTTCGATCGCCCCGCCACCACCGAGCCGGAGCATTCGGAACTCCTCCGGCTGGTCGAGTCCCTCACTCCCCGGCAGTACGAGTGCCTGGAACTGCTCATGGAAGGCAAGAGCACCGTGGCCATCGCCCACCACCTGGGGGTGTCGGTGATGACCGTGCGCAGCCACGTGCAGGCCGTGCTCGTGAAATTGGGAGTGCGCTCGCGACTGGAAGCTGCTTCGCTCATGACGAAGGTGCATGCCGCGATGCCCCTGCGGGACGGCGGCGGACGTACGACGGCCGATGGAGGCGTGCCTGCTTAG
PROTEIN sequence
Length: 230
MEQAYAIVIADIDVLTVEYVSDLLERHGFRVRIAPPVHAAVGDWIHRYGADLCLLDIALRDGADVTDIAWLHSEHPETKIVIRTANTSPETMRDALAAGASGYVHKSRGPVILIEALRRVLEGEIVVEGSFDRPATTEPEHSELLRLVESLTPRQYECLELLMEGKSTVAIAHHLGVSVMTVRSHVQAVLVKLGVRSRLEAASLMTKVHAAMPLRDGGGRTTADGGVPA*