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scnpilot_solids2_trim150_scaffold_3556_5

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: 6124..6414

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Nocardiopsis salina RepID=UPI000366303F similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 93.0
  • Bit_score: 141
  • Evalue 3.40e-31
transcription factor WhiB similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 78.0
  • Bit_score: 139
  • Evalue 5.30e-31
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 78.0
  • Bit_score: 139
  • Evalue 2.40e-30

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Taxonomy

Nocardiopsis alba → Nocardiopsis → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 291
ATGACCACGGGCCCTGAAGACCCGCGGATGCGGGAGATCGCGGCCGCGATCCTCGGTACGTACAGCAGCGACGACGACCGCTGGCAGGAACGGGCGTTGTGCGCTCAGACCGATCCGGAGGCGTTCTTCCCGGAGAAGGGCGGATCGACGCGCGAGGCGAAGAAGATCTGCGAAGTGTGCCCCGTGCGAGAACAGTGCCTGGCCTATGCGCTGGAGCACGACGAACGATTCGGCATCTGGGGAGGGCTTTCCGAACGGGAGCGGCGGCGGCTCAAACGCGCGGCAGGCTGA
PROTEIN sequence
Length: 97
MTTGPEDPRMREIAAAILGTYSSDDDRWQERALCAQTDPEAFFPEKGGSTREAKKICEVCPVREQCLAYALEHDERFGIWGGLSERERRRLKRAAG*