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scnpilot_solids2_trim150_scaffold_3556_14

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: 12911..13186

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 89.0
  • Bit_score: 143
  • Evalue 2.70e-32
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 95 similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 89.0
  • Bit_score: 143
  • Evalue 1.20e-31
DNA-directed RNA polymerase subunit omega n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XII5_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 89.0
  • Bit_score: 143
  • Evalue 8.50e-32

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 276
ATGGACAGCGCCGCCGCGACGCCCGCACAGATCATCGAAGCCGGGATCACCTACCCGCCGATCGATGAGCTGCTCACCAGGGCCAGCTCCAAGTACGCCCTCGCCGTGTATGCCGCGAAGCGCGCGCGTCAGATCAACGACTACTACTCGCAGCTGTCCGAGGGTCTGCTCGAATACGTCGGCCCGCTGGTCGATCCGCTGCCGCGGGAGAAGCCGCTGTCCATCGCCCTGCGCGAGATCAACGCGGATCTGCTGGAGCACACCGAAGGCGTCTGA
PROTEIN sequence
Length: 92
MDSAAATPAQIIEAGITYPPIDELLTRASSKYALAVYAAKRARQINDYYSQLSEGLLEYVGPLVDPLPREKPLSIALREINADLLEHTEGV*