ggKbase home page

scnpilot_solids2_trim150_scaffold_2911_3

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: 1770..3143

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00035E538D similarity UNIREF
DB: UNIREF100
  • Identity: 28.1
  • Coverage: 417.0
  • Bit_score: 158
  • Evalue 1.70e-35
Uncharacterized protein {ECO:0000313|EMBL:KGJ73467.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.5
  • Coverage: 404.0
  • Bit_score: 187
  • Evalue 4.70e-44
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 29.9
  • Coverage: 384.0
  • Bit_score: 158
  • Evalue 6.80e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cryobacterium roopkundense → Cryobacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1374
ATGAGGACACATCGCACCGCTTTTGCGATTGCGGCCGCGCTCAGCATGGTGGTCGCGGCCTGCAGCAGCACCAGTACGGATCAGCAATCGAGCGCGTCCAGCGAGCCGTCGAGCCAGCAGTCCGCGTCGAGCGAGCAGAGCTCGGCGTCGGGCAGCGAGTCGGCCGCATCGTCGTCCGAGGGTTCGAGCGAGACTGCTTCCGGCGAGCCGACATTCACCGGAGAGCCGCTGAAGATCGGCTTCCTCGACACGATGACCGGGCCCAACGGCAATGTCGGGACGTTGAATCTGCAGGGCGCCCAGATCGCCGTCGACCAGTGGAATGCCAAGGGGGGAGTGCTGGGGCGCAAGATCGAGCTCGTCGTCAAGGACGAGGAGCTTTCGCCGGAAAAGACCGTGCAGCACATGCGCGACTTCAATTCCGAGGGGATCAATCTGATCACCGGCTTCACGTCGAGCGCCGATGTCCTCGCCGCCAAGCCGCTTGCCGAGCAGAACAACATGGTCATCGTGACAGCGGGCACCACCGACACGTCACTGACGACGACCGAGCACAGCGCGAATGTCTACGAGATCGCCGCCAACATCAAGATGATGAACGTCGCGGCGGCCCACCTCGCCGAAACCGATTGGAAAGACGTGAAGGTGTGGGACGGGGTGAACTACGACTATCTGACCGGCCATAATTCGTGGGACGAATTCAACAAAATGATCAAGTCCGGCACGAGCGGTTCTACGACCGGCAAGGTGGCATTCGTGCCCTTCACCGCGACGCAGATGACTCCGTTCATCAACTCGCTGCTGGCGGGCAACCCGGACCCGAAGACCTCGGGGCTCTACTACTTCCTCTTCGGCGGTGGCGCGGTTCAGTTCGCCAAGCAGGCCATGCCGCTGGACATGTTCAAGGACTACGCGGTCGTCGCAGCGGTGGGCGGTGGTGAGGAGTTCTCCGCGGCGCTCGGCGCCGAGGGCCCGCACGTGTACTTCGTGCACGACTACTTCTACCAGGGCTACGACAACCCGGTGAACAAGCAGTTCATCGAGGACTGGTCCAAGCTGGATCAGATCCCGGGCCTGAGCCTGTACGGCCCGCACGAGTGGGCCTATGAGGGCTACACCGCGATGCTCGCCTACCTCAATGCCATCACCGATGCCGGCAGCACCGACAGCGACGCGGTGAAGGCTTCTCTGTCGAAGATCGAGTTCGACAGTCCCATGGGCAAGGTGAAGTTCCATCCGTCGAACATCCTCGAGGCGCCGGTCACGGTCTGGGAATGCCAGGGCGACTCCGCGGAGAAGTTCGGCTACAAGTGCTTCAACACCCAGTCGATCCCGCCGAGCATCACGCTGGCGGACGCACCGACCAGCTTCTGA
PROTEIN sequence
Length: 458
MRTHRTAFAIAAALSMVVAACSSTSTDQQSSASSEPSSQQSASSEQSSASGSESAASSSEGSSETASGEPTFTGEPLKIGFLDTMTGPNGNVGTLNLQGAQIAVDQWNAKGGVLGRKIELVVKDEELSPEKTVQHMRDFNSEGINLITGFTSSADVLAAKPLAEQNNMVIVTAGTTDTSLTTTEHSANVYEIAANIKMMNVAAAHLAETDWKDVKVWDGVNYDYLTGHNSWDEFNKMIKSGTSGSTTGKVAFVPFTATQMTPFINSLLAGNPDPKTSGLYYFLFGGGAVQFAKQAMPLDMFKDYAVVAAVGGGEEFSAALGAEGPHVYFVHDYFYQGYDNPVNKQFIEDWSKLDQIPGLSLYGPHEWAYEGYTAMLAYLNAITDAGSTDSDAVKASLSKIEFDSPMGKVKFHPSNILEAPVTVWECQGDSAEKFGYKCFNTQSIPPSITLADAPTSF*