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scnpilot_solids2_trim150_scaffold_6488_4

Organism: SCNPILOT_SOLID2_TRIM150_Truepera_66_81

near complete RP 43 / 55 BSCG 41 / 51 ASCG 8 / 38
Location: 3474..4838

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CWA1_TRURR similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 461.0
  • Bit_score: 583
  • Evalue 2.10e-163
  • rbh
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 461.0
  • Bit_score: 583
  • Evalue 6.60e-164
  • rbh
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.7
  • Coverage: 461.0
  • Bit_score: 583
  • Evalue 2.90e-163

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Taxonomy

Truepera radiovictrix → Truepera → Deinococcales → Deinococci → Deinococcus-Thermus → Bacteria

Sequences

DNA sequence
Length: 1365
GTGGCGAAGACCGCCGCTAAGTCCACGTCCAAGGTCGCGAGCAAGCCGGCCGCAAAGGCGGCTGCTAGCACCGCGGTGGCGAAGGTCAAGGACGCCAAGACGGCGGACAACAGTGATGCCACCGCTGCAACCTGGCTGCAGTCGCCGGTCATCTCTGCGCTCGTAGCGCATGGCCTCGAGGCAGGCGGACAGCTCGACACCGAGGAGATCAGTGACGCCTTCCGGCGCGCCGTCGAGGAAGCCGGCCTCGACGTCGAGCAGGAGAGCTTCGAGGAGCTCATGGGGCATCTCGAAGCGCGCGGAGTCGCAGTAGCCGACTTGGCAGACGACGAACTCATCGACGACGAAGACCTCGACGACGACGAGCTCGAAGAAGAGTCAGACGACGAGATGGATCGCGAGGAACTTGAGGCCCGCGCCGAGGCCATGGCCGATGCGCGCCCCAAGACCAACGACCCAGTTAGGCAGTACCTGCAGGAGATCGGCCGCGTGAAGCTCCTTACGCTTGACGAGGAGATCGACCTCGCGAGGCGCATCGAGGACGGCGAGGCGTCGCGCGCCATCCTCGCGGAGTGGAACGACGACGGCGAGGAGCGCCAACGTCGGCGCCACCAGCGCATCGTCGAGGACGGCGACCTCGCCCGCAAGCACCTCATCGAGGCTAACTTGCGCTTGGTCGTTAGCATCGCCAAGAAGTACAACGGCCGCGGCATGAGCTTCCTCGACCTCATCCAAGAGGGCAACCAGGGCCTCATTCGCGCCGTCGAGAAGTTCGAGTACCGCAGGCGCTACAAGTTCTCCACCTACGCAACGTGGTGGATCAGGCAGGCCATCAACCGCGCCATCGCCGATCAGTCGCGCACCATCCGCATACCCGTGCACATGGTCGAGACCATCAACAAGCTCACGCGCGCCAGCCGCCGCCTGCAGCAGGAACTCTCGCGCGAACCAACTTTCGCCGAGATAGCAGACGCCATGGGCCCCGACTGGAACGCTGAGAAGGTCGAGGAGGCGTTCAAGCTCACGCGTGAACCGTTCTCCCTCGAGACCCCGATCGGCGACGAGGAAGATAGCTTCTACGGCGATTTCATCCCGGACGAGAACATCGAGTCGCCCGTCGATGAGGCCTCCAAGAACATCCTCAGCGAGGAACTCGACGAGGCGCTCAACAAGCTGAACGAGCGCGAGGCGATGGTCCTCAAGCTCCGCAAGGGCCTGGTCGACGGTCGCGAGCACACGCTCGAGGAAGTGGGAAGCCACTTCGGCGTGACTCGCGAACGCATCCGCCAGATCGAGAACAAGGCGCTCCGCAAGCTCAAGTACCACGAGAGCCGCACCCGTAAATTGCGGGACTTCCTCGACTGA
PROTEIN sequence
Length: 455
VAKTAAKSTSKVASKPAAKAAASTAVAKVKDAKTADNSDATAATWLQSPVISALVAHGLEAGGQLDTEEISDAFRRAVEEAGLDVEQESFEELMGHLEARGVAVADLADDELIDDEDLDDDELEEESDDEMDREELEARAEAMADARPKTNDPVRQYLQEIGRVKLLTLDEEIDLARRIEDGEASRAILAEWNDDGEERQRRRHQRIVEDGDLARKHLIEANLRLVVSIAKKYNGRGMSFLDLIQEGNQGLIRAVEKFEYRRRYKFSTYATWWIRQAINRAIADQSRTIRIPVHMVETINKLTRASRRLQQELSREPTFAEIADAMGPDWNAEKVEEAFKLTREPFSLETPIGDEEDSFYGDFIPDENIESPVDEASKNILSEELDEALNKLNEREAMVLKLRKGLVDGREHTLEEVGSHFGVTRERIRQIENKALRKLKYHESRTRKLRDFLD*