ggKbase home page

scnpilot_solids2_trim150_scaffold_924_6

Organism: SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9

near complete RP 46 / 55 MC: 1 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 6092..6901

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase specialized sigma subunit, sigma24 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DM59_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 50.4
  • Coverage: 270.0
  • Bit_score: 240
  • Evalue 1.50e-60
DNA-directed RNA polymerase subunit sigma24 similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 270.0
  • Bit_score: 240
  • Evalue 4.70e-61
DNA-directed RNA polymerase specialized sigma subunit, sigma24 {ECO:0000313|EMBL:AGA29890.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 270.0
  • Bit_score: 240
  • Evalue 2.10e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 810
GTGGCGGGAGGAACCGGGCGGGAACGACGGGCGCATCGGTCGTACAAGCCGGCCGTGGAGGGGATGGAGGCGTTGCGCCTGCTCTCGGGCGCCGCGCACGCCGCGTCCCTGGCCGTCTTTCCGACCGACGCCGGGCCGACGGTCGAGGCGGCGTCGGCGGCGCCGACGCTCGCTCCCTCGCCGGGGTTGACCGCCGAGAGTTGGGACGCGGCGCTTCTGGCCGGCCGCCTGGACGACCTGCTGTCGTCTCGGGAGGAGGCCGGCGTCGCGGTCGCCGATCCGGTCGACGAGCGGGCGATGGCCTCCGGGCTCGACCAGCTCGACCGCTACCTCGTCCGGTCGTGGCAGCGGGCGGGGCTCTCGCCCCAGAGCTACGAGGACGCCTCCCAGGCGGTCTACGCCACCCTGCTTCAGCATCTCGGCCGCGATCGCTTCGACGCCGTGCTCGGCGACGTCGGCCGGGGGGGCGTCAAGGAGGTCTTCTCCAAGGAGACCGCCGAGGGGATGGACTTCTTCCGAGCCGTGGACATGGTCAAGAAACGGATCCAGCGCGAGCGGACCCATCAACCGCTGGACGATCTGACCGCCTCCGTCGACGACTCCGCGTCCCGCGACCGTCTCGACGCGCTCCGGGAGGCGATCGACCGCGAACTCACCCCGCGCGAGGCCCGCCTCATCCAGGACTCCATGATGGGCCGCACCCCCGCGGAGATCGCCGACTCCTGGGGCGTCGCCCCCAAGACCGTCAGCAACGAGAAGACCCGCGTCCTGAACAAGCTCCGCGAGGCGCTTGGGACTCAAGCGGTCTGA
PROTEIN sequence
Length: 270
VAGGTGRERRAHRSYKPAVEGMEALRLLSGAAHAASLAVFPTDAGPTVEAASAAPTLAPSPGLTAESWDAALLAGRLDDLLSSREEAGVAVADPVDERAMASGLDQLDRYLVRSWQRAGLSPQSYEDASQAVYATLLQHLGRDRFDAVLGDVGRGGVKEVFSKETAEGMDFFRAVDMVKKRIQRERTHQPLDDLTASVDDSASRDRLDALREAIDRELTPREARLIQDSMMGRTPAEIADSWGVAPKTVSNEKTRVLNKLREALGTQAV*