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scnpilot_solids2_trim150_scaffold_4471_3

Organism: SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9

near complete RP 46 / 55 MC: 1 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(4265..4870)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Schlesneria paludicola RepID=UPI00029A337E similarity UNIREF
DB: UNIREF100
  • Identity: 36.1
  • Coverage: 191.0
  • Bit_score: 96
  • Evalue 4.50e-17
Probable RNA polymerase sigma-E factor {ECO:0000313|EMBL:EDL57674.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.1
  • Coverage: 184.0
  • Bit_score: 90
  • Evalue 3.50e-15
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 31.0
  • Coverage: 184.0
  • Bit_score: 82
  • Evalue 2.10e-13

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Taxonomy

Gimesia maris → Gimesia → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 606
ATGGGTCGCCACCTCGATCGCGATGCGGCGCGACCCGTCGGCCGTGCGGGAACGGGCGTCCTGGAGCGGTGCCGCGCCTACCTGGAGCGCCGGGCGCGACGGATGATCCCCGCGCCGATGCGAGCGAAGGTCGCCGCGAGCGATCTGGTGCAGGAGGCGTTCGTGGACGCGGCCAGGCGTGCGGGGGAAATGCCGAAGGGGCGATCCGACGAGTTGCGGGCGTGGTTGTATCGAATCATGGCGTTGAACCTCGCCGAGCAACGGCGGAAGTTCCTGGGGACGGCCCGCGCCGACGTCCGTCGCGAGGTCCGTCTGGAGGCGACGCCCCAGCGCGCGGGGCTCGCGACGCTCCGCGACCGGTTGGTCGGCGGGGACGAGTCGCCCTCGAAGCGGGCGGCCGGCCGCGAGGAGAAGACGCGCCTCGTCGCCGCGATCGCCGCGTTGCCGGCTGCCGAGCGCGACGTCGTGAGGCTACGCTACTGGGAGCGGCTGGAATACGCCGAGATCGGCCGACGCCTGGGTGGTCGGTCGGCCGACGCCGCCCGCATGCTCCACGCCCGCGCCTGCCGCCGACTGTTCCGCGTGATGGAAGGGGAGACGTCGTGA
PROTEIN sequence
Length: 202
MGRHLDRDAARPVGRAGTGVLERCRAYLERRARRMIPAPMRAKVAASDLVQEAFVDAARRAGEMPKGRSDELRAWLYRIMALNLAEQRRKFLGTARADVRREVRLEATPQRAGLATLRDRLVGGDESPSKRAAGREEKTRLVAAIAALPAAERDVVRLRYWERLEYAEIGRRLGGRSADAARMLHARACRRLFRVMEGETS*