ggKbase home page
This organism can only be binned in the context of its binning project GWA2. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

scnpilot_solids2_trim150_scaffold_14_124

Organism: SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 130632..131396

Top 3 Functional Annotations

Value Algorithm Source
Short chain dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQG7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 254.0
  • Bit_score: 344
  • Evalue 7.00e-92
  • rbh
Short chain dehydrogenase {ECO:0000313|EMBL:EHK57025.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.7
  • Coverage: 254.0
  • Bit_score: 344
  • Evalue 9.80e-92
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 254.0
  • Bit_score: 340
  • Evalue 4.10e-91
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium alhagi → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
ATGGCGAAAAATCTCAAGACAGCCCTCGTCACCGGCGGCGCCAGACGGATCGGGAAAGCCATCGCCAGCGACCTTTCCGCTGCCGGTTTCGCCGTCGCGATCCACTATCACGGGTCGGACGAAGAAGCGCGGGAATTGGTTAAAATCCTTAAGGATGCGGGCGGAAAGGTGGCGATCGTGCGCGCCGACCTGACTGATATCGGGGCCGTGGAGGGTTTATTGAGCGATGCCGCCTCGGCGATCGGGCCGATCGGGCTTCTGGTCAATAATGCCTCCGTCTTCAACGCGGACGAACTGCACGATTTCACTTGGGAGCATTGGGACAGGCATTTCGCCGTCCATCTCAAGGCGCCGGTCGAGCTTTCCCGGCGCTTCGCCGAGGCGCTGCCGCAAGGCGAGGACGGGCTTGTTGTCAACATGATCGACCAGCGCGTCTGGAAACTTTCGCCACGAACCTTTAGCTATACTCTGTCGAAATCGGCGCTGTGGACGGCGACGCAGACGATGGCGCAGGCGCTGGCGCCGCGCATCCGGGTCAACGCGATCGGTCCCGGCCCGACATTGCAGGGCGAACGCCAGTCGAAGGCCGATTTCGATGCGCAGATCGAGGCGGTGCTGCTCAGGCGGGGACCGGAACTTTCCGAGTTCGGCGCGACGATACGCTATCTGTGGGATACGCCCTCGATCACCGGCCAGATGATCGCGCTCGACGGCGGCCAGCATCTGGGCTGGCAGACGCCGGACGTGACGGGAATTCATGAATGA
PROTEIN sequence
Length: 255
MAKNLKTALVTGGARRIGKAIASDLSAAGFAVAIHYHGSDEEARELVKILKDAGGKVAIVRADLTDIGAVEGLLSDAASAIGPIGLLVNNASVFNADELHDFTWEHWDRHFAVHLKAPVELSRRFAEALPQGEDGLVVNMIDQRVWKLSPRTFSYTLSKSALWTATQTMAQALAPRIRVNAIGPGPTLQGERQSKADFDAQIEAVLLRRGPELSEFGATIRYLWDTPSITGQMIALDGGQHLGWQTPDVTGIHE*