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scnpilot_solids1_trim150_scaffold_284_3

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 10 / 38
Location: comp(1883..2809)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 308.0
  • Bit_score: 601
  • Evalue 7.00e-169
tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 308.0
  • Bit_score: 540
  • Evalue 2.50e-151
tRNA pseudouridine synthase B n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6K1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 308.0
  • Bit_score: 601
  • Evalue 5.00e-169
  • rbh

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGAGTCGCCAGTCCCGCATCCAGTTCCGTGACCTGCACGGCATCGTCCTGCTCGACAAGCCGCTGGGCCTGAGTTCCAACCAGGCGCTGCAGGCCGTGCGTCGCCTGCTGCGTGCGTCCAAGGGCGGCCACACCGGCGCGCTTGATCCGCTGGCCACCGGGCTGTTGCCGCTGTGTTTCGGCGAGGCCACCAAGCTGGCCGGCAGCCTGCTCGGTGCGCGCAAGGCGTATCTGGCCGAATGCCGGCTGGGCATCAGCACCGATACGGCTGACAGCGAAGGCGAGATCGTTCGCCGGTTGCCGGTGCCGCCGCTCGACGCGGCGGCGATCGAGACGGCGCTGGCCAGGCTTCGCGGCCACATCCTGCAGGTGCCGCCGATGTATTCGGCGCTGAAGCACGACGGCGAGCGGCTTTACGCCAAGGCTCGCCGGGGCGAGGTGGTCGACGTGCCCGCGCGCGAAGTGGACGTGCACCGCCTGGAATTGCTCGAGCGCGACGGGGAAACCCTGCGACTGCTGGTGGAATGCGGTTCGGGCACCTATGTCCGCTCGCTGGCGGTCGATCTGGGTGAGGATCTCGGCTGCGGCGCCCACCTGACCGCATTGCGGCGGATCTGGGTCGAGCCGTTCCGCGAGCCGCAGATGGTGACCCTGGCGCAGCTCGAGCAGGCCGCGGAGCAGGGTGACGACGCGCTGCTGGCATGGCTGCTGCCGGTATCGGCGGGCCTGTCGGATCTGCCGGTCCTGCACCTGGACGAAGCGCAGAGCATGGCGATTTCACGTGGTCAGCAGATCAGCCTGCCGGGGTTGCCGGAAGCCGGTCGCTGCGCGGCCTACGCCAGCGACGGTGCGCTGCTGGCGCTGCTGGAGAGCGATGCGAAAGGACGTGCCCGCGTCATTCGCGGCTTCAACCTGCCGCCGGACTGA
PROTEIN sequence
Length: 309
MSRQSRIQFRDLHGIVLLDKPLGLSSNQALQAVRRLLRASKGGHTGALDPLATGLLPLCFGEATKLAGSLLGARKAYLAECRLGISTDTADSEGEIVRRLPVPPLDAAAIETALARLRGHILQVPPMYSALKHDGERLYAKARRGEVVDVPAREVDVHRLELLERDGETLRLLVECGSGTYVRSLAVDLGEDLGCGAHLTALRRIWVEPFREPQMVTLAQLEQAAEQGDDALLAWLLPVSAGLSDLPVLHLDEAQSMAISRGQQISLPGLPEAGRCAAYASDGALLALLESDAKGRARVIRGFNLPPD*