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SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34

SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_spathiphylli_67_34

Consensus taxonomy: Rhodanobacter spathiphylli  →  Rhodanobacter  →  Xanthomonadales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 151-175 of 175 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_solids1_trim150_scaffold_26436
Species: Rhodanobacter spathiphylli (100%)
1 1444 bp 64.54 37.19 99.93
scnpilot_solids1_trim150_scaffold_27155
Species: Rhodanobacter spathiphylli (100%)
2 1416 bp 69.14 33.16 101.06
scnpilot_solids1_trim150_scaffold_27898
Species: Rhodanobacter spathiphylli (100%)
1 1387 bp 66.55 38.07 99.93
scnpilot_solids1_trim150_scaffold_28831
Genus: Rhodanobacter (66.67%)
3 1354 bp 68.17 36.12 95.49
scnpilot_solids1_trim150_scaffold_29628
Species: Rhodanobacter thiooxydans (50%)
2 1329 bp 64.26 34.42 85.10
scnpilot_solids1_trim150_scaffold_30429
Species: Rhodanobacter denitrificans (100%)
2 1304 bp 67.02 31.17 86.96
scnpilot_solids1_trim150_scaffold_30589
Species: Rhodanobacter denitrificans (100%)
1 1300 bp 67.62 37.27 99.92
scnpilot_solids1_trim150_scaffold_31145
Species: Rhodanobacter thiooxydans (100%)
1 1282 bp 65.99 34.52 99.92
scnpilot_solids1_trim150_scaffold_31518
Genus: Rhodanobacter (66.67%)
3 1271 bp 63.81 36.00 76.24
scnpilot_solids1_trim150_scaffold_31941
Species: Rhodanobacter spathiphylli (100%)
1 1258 bp 67.33 27.78 99.92
scnpilot_solids1_trim150_scaffold_31967
Species: Rhodanobacter spathiphylli (100%)
1 1258 bp 67.01 36.13 99.92
scnpilot_solids1_trim150_scaffold_32575
Species: Rhodanobacter spathiphylli (100%)
2 1241 bp 66.80 33.00 82.68
scnpilot_solids1_trim150_scaffold_33785
Species: Rhodanobacter denitrificans (50%)
2 1208 bp 63.99 34.15 90.15
scnpilot_solids1_trim150_scaffold_35671
Species: Rhodanobacter denitrificans (100%)
2 1161 bp 69.85 32.95 100.26
scnpilot_solids1_trim150_scaffold_36285
Species: Rhodanobacter spathiphylli (100%)
1 1147 bp 64.86 37.27 99.91
scnpilot_solids1_trim150_scaffold_36579
Species: Rhodanobacter denitrificans (100%)
2 1141 bp 66.96 37.99 99.91
scnpilot_solids1_trim150_scaffold_36631
Species: Rhodanobacter fulvus (100%)
1 1140 bp 66.67 35.79 100.00
scnpilot_solids1_trim150_scaffold_37250
Species: Rhodanobacter spathiphylli (100%)
1 1126 bp 63.59 22.65 99.91
scnpilot_solids1_trim150_scaffold_37523
Species: Rhodanobacter denitrificans (100%)
1 1119 bp 70.87 31.10 99.73
scnpilot_solids1_trim150_scaffold_40052
Species: Rhodanobacter spathiphylli (50%)
2 1066 bp 66.70 31.66 56.29
scnpilot_solids1_trim150_scaffold_40373
Species: Rhodanobacter sp. 115 (100%)
1 1060 bp 67.83 32.41 99.91
scnpilot_solids1_trim150_scaffold_42027
Species: Rhodanobacter denitrificans (100%)
1 1028 bp 70.04 33.85 99.81
scnpilot_solids1_trim150_scaffold_42394
Species: Rhodanobacter spathiphylli (100%)
1 1023 bp 66.86 31.96 99.71
scnpilot_solids1_trim150_scaffold_42512
Species: Rhodanobacter spathiphylli (100%)
1 1020 bp 67.75 34.71 100.00
scnpilot_solids1_trim150_scaffold_42819
Species: Rhodanobacter spathiphylli (50%)
2 1015 bp 70.94 37.39 95.76
Displaying items 151-175 of 175 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.