ggKbase home page

scnpilot_solids1_trim150_scaffold_5033_2

Organism: SCNPILOT_SOLID_1_TRIM150_Brevundimonas_68_22

near complete RP 43 / 55 MC: 1 BSCG 44 / 51 MC: 1 ASCG 6 / 38 MC: 2
Location: comp(1399..1698)

Top 3 Functional Annotations

Value Algorithm Source
Putative multidrug efflux pump BpeF n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QS23_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 99.0
  • Bit_score: 204
  • Evalue 4.40e-50
Putative multidrug efflux pump BpeF {ECO:0000313|EMBL:EKY30818.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 99.0
  • Bit_score: 204
  • Evalue 6.20e-50
hydrophobe/amphiphile efflux-1 (HAE1) family transporter similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 101.0
  • Bit_score: 106
  • Evalue 4.00e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGACCTCGTTCGCCTTCATCTTCGGCGTGCTGCCCCTGGCCATCGCCACGGGCCCCGGCTCGGAGATGCAGAACGCCCTGGGCATCGCGGTGGTCTATGGGATGCTGGGTGTGACCTTCTTCGGTCTGATCTTCACCCCCGTCTTCTACGTCATCTGTCGCTGGATGGCGGGCAAGCTGCCCAAGGCGCCGGGCAAGGAGCGCGAGCTCCCGACCAGCTTCGGCGCTCCGCCGCACGACCCCTTTGACCCCGACGGCCCGGAACCGGCTCCCGCCGCTCCGCGCCAGGGAGATGCGTAA
PROTEIN sequence
Length: 100
MTSFAFIFGVLPLAIATGPGSEMQNALGIAVVYGMLGVTFFGLIFTPVFYVICRWMAGKLPKAPGKERELPTSFGAPPHDPFDPDGPEPAPAAPRQGDA*