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scnpilot_solids1_trim150_scaffold_374_3

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(1369..2316)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 305.0
  • Bit_score: 474
  • Evalue 1.00e-130
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WT09_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.7
  • Coverage: 305.0
  • Bit_score: 474
  • Evalue 7.30e-131
S-adenosyl-methyltransferase MraW similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 307.0
  • Bit_score: 468
  • Evalue 1.60e-129

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
GTGGCGAACCCTGAGCAGCCATTGCGGCATGTCCCGGTGATGTTGGATGAGGCGGTGGAGGGTCTGTCGGTGCGCGCAGACGGACGATACCTTGATGGCACATTTGGTCGCGGTGGACACGCGCGTGCGGTGCTGGCCCGGCTTGGCGCGCATGGCCAGTTGCTGCTGATGGACCGCGACCCGGCGGCCATCGCCGCGGCGCGCGACGAATTTGCCGACGATCCGCGCGTGGCCATCCGCCAGGCCAATTTCTCCAGCCTGGGCACGTGGGAGGCCACCGCCGCCGGGCTCGATGGCGTGCTGCTCGACCTCGGCGTCTCCTCGCCGCAGCTGGACGAGGCGGCGCGTGGTTTCAGCTTCCTGCACGACGCGCCGCTGGACATGCGCATGGATCCGGAGACCGGACCCGGCGTGGCGGACTTCCTGGCCCGCGCCAGCGAGGCGGAGATTGCCGACGTGCTGTGGGAGTACGGCGAGGAGCGCCATGCGCGGCGCATCGCCCGGGCCATCGTCGCCGAGCGGCAGGCGCGGCCGCTGCTGCGCACCACCCAGCTGGCTGCGCTGATCGAGCGCGTGGTGGGCTGGCACGAGCCCGGCAAGCATCCGGCGACACGCAGCTTCCAGGCCCTGCGCATCCAGGTGAATGGGGAATTGGCCGCCCTGCAGGCCGGACTCGAGGTTGCCCTCGAACGCCTGCGCCCTGGTGGCCGGCTGGCGGTGATCAGCTTCCATTCGCTGGAGGACCGCAGCGTCAAGCGGTTCATCCGCGCCCAGTCGGGTCGCGTGCAGAACCGCCGGCGCGGGCCGCCGGTGGTGGCGCCGGCAGCGCGGCTCATGGCAGTGGGCAAGGCGCACTTTCCGGGTGCTGCCGAGTTGGCAGCCAATCCGCGTGCGCGCTCGGCGGTGCTGCGCATCGCGGAAAAATTGCCCGCGGCGGTGGCCGCATGA
PROTEIN sequence
Length: 316
VANPEQPLRHVPVMLDEAVEGLSVRADGRYLDGTFGRGGHARAVLARLGAHGQLLLMDRDPAAIAAARDEFADDPRVAIRQANFSSLGTWEATAAGLDGVLLDLGVSSPQLDEAARGFSFLHDAPLDMRMDPETGPGVADFLARASEAEIADVLWEYGEERHARRIARAIVAERQARPLLRTTQLAALIERVVGWHEPGKHPATRSFQALRIQVNGELAALQAGLEVALERLRPGGRLAVISFHSLEDRSVKRFIRAQSGRVQNRRRGPPVVAPAARLMAVGKAHFPGAAELAANPRARSAVLRIAEKLPAAVAA*