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scnpilot_solids1_trim150_scaffold_5283_1

Organism: SCNPILOT_SOLID_1_TRIM150_Lysobacter_69_7

partial RP 26 / 55 MC: 1 BSCG 26 / 51 ASCG 2 / 38
Location: 3..2837

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 943.0
  • Bit_score: 1651
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 952.0
  • Bit_score: 1639
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DC8C19 similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 946.0
  • Bit_score: 1648
  • Evalue 0.0

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2835
CTGGTCTGCACCGCGTTCAACGCCGACTTCGACGGTGACCAGATGGCCGTGCACGTGCCGCTGTCGCTGGAAGCCCAGCTGGAAGCACGCGCGCTGATGATGGCGTCGAACAACATCCTGTCGCCGGCCAACGGCGAGCCGATCATCGTGCCGTCGCAGGACGTGGTGCTGGGCCTGTACTACATGACCCGCGCGCTGGAGAACAAGGCGGGCGAGGGCATGGTGTTCGCCAACATCGCCGAGGTGAAGCGCGCCTACGACAACCGCGTGGTCGAGCTGCACGCCAAGTGCAAGGTGCGCATCACCGAGACCGTGGTGGCCGAGGATGGCAGCCGCAGCCAGCAGACCTCGATCGTGGACACCACGGTCGGGCGCGCCCTGCTGCGCGAAATCCTGCCGGAAGGCCTGCCGTTCGCGCTGGCCAACACCGAGCTGAGCAAGAAGAACATCAGCCGCCTGATCAACAGCTGCTACCGCATGCTGGGCCTGAAGGACACGGTGGTGTTCGCCGACAAGCTGATGTACACCGGCTTCGCCTACGCCACCCGCGCCGGCGTGTCGATCGGCATCGACGACATGACCATCCCGCTGGAGAAGAAGTCGATCCTCGACGAGGCCGAGGCCGAGGTGCTGGAAATCCAGCAGCAGTACCAGTCGGGCCTGGTCACCGCCGGCGAGCGCTACAACAAGGTGGTCGACATCTGGTCGCGCACCAACGAGCGCGTCGCCAAGGCGATGATGGATACCATCGGCACCGAGAAGGTGGTCAACGCCAAGGGCGAGACCATCGACCAGAAGTCGATGAACTCGATCTACATCATGGCCGACTCCGGTGCGCGTGGTAGCCAGGCGCAGATCCGCCAGCTGGCCGGCATGCGCGGCCTGATGGCCAAGCCGGACGGCTCGATCATCGAGACCCCGATCACCTCGAACTTCCGCGAGGGCCTGAACGTCCAGCAGTACTTCATTTCGACCCACGGTGCCCGTAAGGGCCTGGCGGATACCGCGCTGAAGACCGCGAACTCCGGTTACCTGACCCGCCGCCTGGTCGACGTGGCGCAGGACGTGGTGATCACCGAAACCGACTGCGGCACGCTCAACGGCCTGACCCTGACCCCGATCGTAGAAGGCGGCGACGTGGTCGAGCCGCTGAAGGACCGCGTGCTGGGCCGCATCGTGGCCGAGGACGTGTTCCTGCCGGGCAACGACGAGGATCCGTTCATCACCCGCAACACCCTGATCGACGAAGCCTGGGCGCTGCGCCTGGAAGAGGCCGGCGTGCAGGTGATCAAGGTGCGCAGCACCATCACCTGCATGGCACCGTTCGGCGTGTGCGCGCACTGCTATGGCCGCGACCTCGGCCGTGGCCACCTGGTCAACCACGGCGAGGCCGTGGGCGTGGTGGCCGCGCAGTCGATCGGCGAGCCGGGCACCCAGCTGACCATGCGTACGTTCCACATCGGTGGTGCGGCGTCGCGTGCGGCGGCGATCGACAACGTGACGGTGAAGACCACCGGCTCGGTGAAGTTCAACAACCTGAAGTTCGTCACCCACGCAGACAGCCATCTGGTCGCGGTGTCGCGCTCCGGCGAACTGTCGGTGCTGGACAACCACGGCCGCGAGCGCGAGCGCTACAAGCTGCCCTACGGCGCCACCATCCAGTTGCAGGATGGCGGTGAAGTCAAGGCCGGGCAGGTGGTGGCCAACTGGGATCCGCACAACCACCCGATCGTCTCGGAAGTGGCGGGCTTCATCCGCTTCGTCGACTTCGTCGACGGCGTGACCGTGATCGAGAAGACCGACGAACTGACCGGCCTGGCCTCGCGCGAGATCACCGATCCGAAGCGCCGCGGCTCGCAGGGCAAGGACCTGCGCCCGGTGGTGCGCATCGTCGACAAGGATGGCAATGACCTGAACATCCCGGGCACCGACCTCCCGGCGCAGTACCTGCTGCCGCCGCGCTCGGTGGTTAACCTGCAGCACGGCGCCGCCGTGGGCGTGGGCGACGTGGTCGCGAAGATCCCGCAGGAAGCATCCAAGACCCGCGACATCACCGGCGGTCTGCCGCGCGTGGCCGACCTGTTCGAGGCGCGCAAGCCGAAGGATCCGGCGGTGCTGGCCGAGAAGTCCGGCGTGATCTCGTTCGGCAAGGACACCAAGGGTAAGCAGCGCCTGATCATCAAGGGCCCGGATGGCGAGGAGCACGAAGAGCTGATCCCGAAGTACCGCCAGATCATCGTGTTCGAAGGCGAGCACGTGGAGAAGGGCGAGACCGTGGTGGACGGCGAGCCGAGCCCGCAGGACATCCTGCGCCTGAAGGGCGTCGAGGAACTGGCCGCCTACCTGGTCAAGGAAATCCAGGACGTCTACCGCCTGCAGGGCGTGAAGATCAACGACAAGCACATCGAGGTGATCATTCGCCAGATGCTGCGCAAGGTCGAGATCGTGGACCAGGGCGATTCGAAGTTCCTCAATGGCGAGCAGGTCGAGCGGCAGCGCGCCATCGAGGAGAACGAGCGCCTGGCGCGCAAGGGCGAGATCCCGGTCAAGGTGGAGCCGGTGCTGCTGGGCATCACCAAGGCCTCGCTGGCGACCGAGTCGTTCATCTCGTCGGCCTCGTTCCAGGAGACCACTCGCGTGCTGACCGAAGCGGCGGTGCGTGGCACCCGCGACACCCTGCGCGGCCTGAAGGAGAACGTGATCGTCGGGCGCCTGATCCCGGCGGGCACCGGTCTGGCTTACCACAGCCAGCGCCGCAAGAACGCCTCGGGCCTGACCGAAGCGGAAATGGCCACGCTGGCCGGCGAGCCGGCCGAGGCCACGCCCGCGGAGTGA
PROTEIN sequence
Length: 945
LVCTAFNADFDGDQMAVHVPLSLEAQLEARALMMASNNILSPANGEPIIVPSQDVVLGLYYMTRALENKAGEGMVFANIAEVKRAYDNRVVELHAKCKVRITETVVAEDGSRSQQTSIVDTTVGRALLREILPEGLPFALANTELSKKNISRLINSCYRMLGLKDTVVFADKLMYTGFAYATRAGVSIGIDDMTIPLEKKSILDEAEAEVLEIQQQYQSGLVTAGERYNKVVDIWSRTNERVAKAMMDTIGTEKVVNAKGETIDQKSMNSIYIMADSGARGSQAQIRQLAGMRGLMAKPDGSIIETPITSNFREGLNVQQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDVVITETDCGTLNGLTLTPIVEGGDVVEPLKDRVLGRIVAEDVFLPGNDEDPFITRNTLIDEAWALRLEEAGVQVIKVRSTITCMAPFGVCAHCYGRDLGRGHLVNHGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAAIDNVTVKTTGSVKFNNLKFVTHADSHLVAVSRSGELSVLDNHGRERERYKLPYGATIQLQDGGEVKAGQVVANWDPHNHPIVSEVAGFIRFVDFVDGVTVIEKTDELTGLASREITDPKRRGSQGKDLRPVVRIVDKDGNDLNIPGTDLPAQYLLPPRSVVNLQHGAAVGVGDVVAKIPQEASKTRDITGGLPRVADLFEARKPKDPAVLAEKSGVISFGKDTKGKQRLIIKGPDGEEHEELIPKYRQIIVFEGEHVEKGETVVDGEPSPQDILRLKGVEELAAYLVKEIQDVYRLQGVKINDKHIEVIIRQMLRKVEIVDQGDSKFLNGEQVERQRAIEENERLARKGEIPVKVEPVLLGITKASLATESFISSASFQETTRVLTEAAVRGTRDTLRGLKENVIVGRLIPAGTGLAYHSQRRKNASGLTEAEMATLAGEPAEATPAE*