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scnpilot_solids1_trim150_scaffold_1481_15

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_45

partial RP 9 / 55 BSCG 10 / 51 ASCG 2 / 38
Location: 12179..12775

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 205.0
  • Bit_score: 357
  • Evalue 1.50e-95
Transcription termination factor Rho n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZV4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 205.0
  • Bit_score: 357
  • Evalue 1.10e-95
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 206.0
  • Bit_score: 220
  • Evalue 4.90e-55

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
GTGTCCGATACCGATAACAAAATTCCGAACGACGCCAAAAGTGTCGATACCAGGCTCGTGGTCGAGGGCAAGCCCGAGCCGCGCGCCCGCGCGCCCCGGCGCAGCGCCGCTGCAATCGCCGCGGCGAACGCCGAGAAGGCTGCCGGCGGCGAAAAAGCCGCGGCGCCAGCGCCTGCTCCGGCACCCGCGCCAGCACCTGCCCAGGCGAGCCTGCCGATGACCACGACCGAGCCTGCCGCACCGCGCGCAGCGCAGGAACCGCGCGACAACGCCGGCCAGCAGAACGGCCCGCAGAATGCGCCCTCGTCGAATCCGAACCAGGCCGCGAACCAAGGCGGACCGAACCCGGCAGCGGCGCCCGGCGCCAACCCGAATCCGAATGGCGGCCAGAACAATGGCGCCCGCGAAGGTCGTGGTCGCCGCCGGCGCAACGAACGCGGTGACCGCGGCGAGCGCAACAACCAGCAGCAGGGGCGTCCGCAGAACCATCCGCGGCCCAACCCGAACGGCCTGCCGATGGACGACGACAACGCCGATCCGGGCAGCGACACCCGCCTGATCAACCTCACCGAGCTCAAGCGCATGAAGGCGCCGCAG
PROTEIN sequence
Length: 199
VSDTDNKIPNDAKSVDTRLVVEGKPEPRARAPRRSAAAIAAANAEKAAGGEKAAAPAPAPAPAPAPAQASLPMTTTEPAAPRAAQEPRDNAGQQNGPQNAPSSNPNQAANQGGPNPAAAPGANPNPNGGQNNGAREGRGRRRRNERGDRGERNNQQQGRPQNHPRPNPNGLPMDDDNADPGSDTRLINLTELKRMKAPQ