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scnpilot_solids1_trim150_scaffold_5903_4

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_45

partial RP 9 / 55 BSCG 10 / 51 ASCG 2 / 38
Location: 1687..2268

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WW67_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 193.0
  • Bit_score: 357
  • Evalue 1.00e-95
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 91.2
  • Coverage: 193.0
  • Bit_score: 355
  • Evalue 1.20e-95
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGG90514.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 193.0
  • Bit_score: 355
  • Evalue 5.50e-95

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGGATGACATCCGCAGCAGCCCCGACCGCGAGCTGGTCGACGCCGTGCTGGCCAACCGGCCGGGCGCGTTCGAACGCCTCGTGCGCGAACACCAGGGATTGTGCTGGCACATCATCCAGCGCATGGTGCGCAACCCGGAGGACGCGCGCGAGCTGTGCCAGGACACTTTCCTGCGCGTGCACCAGTGCCTGCACCAGTACCGCGGCGAGAGCGCGCTGAAATCCTGGATCGGCCGCGTCGCGTACACCATCGCGCTGCGCCACCTGCAGCACAAGCGCATTGCGCTGGTCGAGCCCAGCGACGACAGCGACGACTACGCGCTGGTGGAAAACATCGGCGACGGCTTCGACCTGGAGGCGGCCTGCGCGGATGAGGAAACGGCGCGCCACCTGCACGCCGCGATCGAGCAGTTGCCGCCCCTGCAGCGCACGCTGCTGACCCTGTACTACCTCGAAGAGGCCACCATTCCGGAGATCGCCCGGATGACAGGACTGGCCAACGGCACCATCAAGAGCCACCTGTTCCGCTCGCGCCTGCGCCTGCGCGGTGCGCTCGAAACACGGACCGGAGTTGCAGCATGA
PROTEIN sequence
Length: 194
MDDIRSSPDRELVDAVLANRPGAFERLVREHQGLCWHIIQRMVRNPEDARELCQDTFLRVHQCLHQYRGESALKSWIGRVAYTIALRHLQHKRIALVEPSDDSDDYALVENIGDGFDLEAACADEETARHLHAAIEQLPPLQRTLLTLYYLEEATIPEIARMTGLANGTIKSHLFRSRLRLRGALETRTGVAA*