ggKbase home page

scnpilot_solids1_trim150_scaffold_6237_4

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_45

partial RP 9 / 55 BSCG 10 / 51 ASCG 2 / 38
Location: comp(3337..3720)

Top 3 Functional Annotations

Value Algorithm Source
Endoribonuclease L-PSP n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNH5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 127.0
  • Bit_score: 221
  • Evalue 4.50e-55
Endoribonuclease L-PSP {ECO:0000313|EMBL:EIM01017.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 127.0
  • Bit_score: 221
  • Evalue 6.30e-55
endoribonuclease L-PSP similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 127.0
  • Bit_score: 220
  • Evalue 3.10e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGCCTTTCGACATCATCGCCACCGACCAGGCACCGGCCGCCATCGGCCCGTATTCGCAGGCCGTGCGTGCCGGCAACACCGTCTATTTTTCCGGCCAGATCCCGCTGGACCCGACCACCGGCAGCCTGGTCGACGGCGACATCGGCATGCAGACGCGACGGGTGTTCGACAATCTCGCCGCGGTGGCGCAGGCTGCCGGCGGCTCGCTGGCGCAGATCGTGCGCGTGGGCATCTATGTCACCGACCTGGCCAACTTCGCCGCCGTCAACGCGGTGATGGCCGAATACTTCCAGCAGCCGTATCCGGCGCGCTCGACCATCGAGGTGTCCGCGTTGCCGAAGGCGGCGCAGGTAGAGGTCGATGCGATCATGGTGCTGGACTGA
PROTEIN sequence
Length: 128
MPFDIIATDQAPAAIGPYSQAVRAGNTVYFSGQIPLDPTTGSLVDGDIGMQTRRVFDNLAAVAQAAGGSLAQIVRVGIYVTDLANFAAVNAVMAEYFQQPYPARSTIEVSALPKAAQVEVDAIMVLD*