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scnpilot_solids1_trim150_scaffold_10797_1

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_45

partial RP 9 / 55 BSCG 10 / 51 ASCG 2 / 38
Location: comp(2..187)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRG2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 62.0
  • Bit_score: 102
  • Evalue 1.50e-19
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 62.0
  • Bit_score: 102
  • Evalue 2.10e-19
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 62.0
  • Bit_score: 97
  • Evalue 1.50e-18

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 186
ATGCCCAACCAAGCCCGTATTGCACCCGTCGACTACGCCACCCTGGATGACCACGCGCTGGTGGCGTGCGTCCGCAACGGCGAGCGCGCGGCGTTCCGACACATCATGCAGCGCTGCAACCAGCGCCTGTTCCGCGTCGCGCGCGCGGTGATCGGCGACGACTCGGAAGCGGAAGACGTGCTGCAG
PROTEIN sequence
Length: 62
MPNQARIAPVDYATLDDHALVACVRNGERAAFRHIMQRCNQRLFRVARAVIGDDSEAEDVLQ