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scnpilot_solids1_trim150_scaffold_8052_1

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingopyxis_68_7

partial RP 31 / 55 MC: 1 BSCG 33 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: 3..3386

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 999.99
  • Bit_score: 2143
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 999.99
  • Bit_score: 2121
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta' n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVX5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 999.99
  • Bit_score: 2143
  • Evalue 0.0
  • rbh

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3384
CTCGAAGTCATTCCGGTCATCCCGCCCGAACTGCGCCCGCTGGTGCCGCTCGACGGCGGCCGCTTCGCGACGTCGGACCTCAACGACCTCTACCGCCGCGTCATCAACCGCAACAACCGTCTGAAAAGGCTGATGGAACTGCGCGCCCCGGACATCATCGTCCGCAACGAAAAGCGCATGTTGCAGGAAGCCGTCGACGCATTGTTCGACAACGGCCGCCGCGGCCGCACGATCACCGGCGCCAACAAGCGTCCGCTCAAGTCGCTGTCCGACATGCTTAAGGGCAAGCAGGGCCGCTTCCGCCAGAACCTGCTTGGCAAGCGCGTCGACTATTCGGGCCGTTCGGTCATCGTGACCGGCCCCGAACTCAAGCTGCACCAGTGCGGCCTGCCCAAGAAGATGGCGCTCGAACTGTTCAAGCCGTTCATCTACGCGCGCCTCGACGCCAAGGGTCTGTCGATGACCCTGAAGCAGGCGAAGAAGTGGGTCGAGAAGGAACGCAAGGAAGTCTGGGACATCCTCGACGAGGTGATCCGCGAGCATCCGGTGCTGCTGAACCGCGCGCCGACGCTCCACCGCCTCGGCATCCAGGCGTTCGAGCCGGTGCTGATCGAGGGTAAGGCGATCCAGCTCCACCCGCTGGTCTGCGCCGCGTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTGCACGTCCCGCTGTCGCTCGAAGCGCAGCTCGAAGCGCGCGTGCTGATGATGTCGACCAACAACATCCTGTCCCCCGCGAACGGCAAGCCGATCATCGTGCCGTCGCAGGACATGGTTCTCGGTCTCTATTATCTGTCGATGGAGCGCGAGGGCGAGCCGGGCGAGGGCATGCTGCTCGCCGACATGGCCGAGGTGCACCAGGCGCTCTACACGGGCGCGGTGACGCTGCACACGCGCGTGATCAGCCGCGTCCCGCAGACCGACGAGCAGGGCAACAGCTACCTCAAGCGGTTCGAGACCACCCCGGGCCGCATGCTGATCGGCGAATGCCTGCCGAAGTCGCACACCGTGCCCTTCGACGTCGTCAACCGTCTCCTCACCAAGAAGGAGATCGGCGACGTCATCGACCAGGTCTATCGCCACACCGGGCAGAAGGAGACGGTGCTGTTCGCCGACGCGATCATGGCGCTGGGCTTCCGTCACGCTTTCCGTGCCGGCATCTCGTTTGGCAAGGACGACATGATCATCCCGGCGGCCAAGGAGAAGCTGGTCGACGAGACGCGCGCCCTGGTGAAGGATTTCGAGCAGCAGTATCAGGACGGTCTGATCACGCAGCAGGAAAAATACAACAAGGCGATCGATGCCTGGTCGCAGTGTGGCGACAAGGTCGCGAACGCGATGATGGACGAGATCCGCGCTACGCCGAAGCTCGACGACGGTCGCCTCGCGCCGATCAACTCGATCTACATGATGGCGCACTCGGGTGCCCGCGGTTCGCAGGCGCAGATGAAGCAGCTCGCCGGCATGCGCGGGCTGATGGCCAAGCCGTCGGGCGAGATCATCGAAACGCCGATCATCTCGAACTTCAAGGAAGGCCTGACCGTCCTCGAATATTTCAACTCGACCCACGGCGCCCGCAAGGGCCTGGCGGACACGGCGCTCAAGACGGCGAACTCAGGCTATCTGACCCGCCGTCTCGTCGACGTGTCGCAGGATTGCGTGGTGATCGAGGAGGATTGCGGCACCGATCGCGGCATGGAAATGCGCGCGATCGTGCAGGGCGGATCGGTGATCGCGTCGCTCGGCGAGCGCATCCTCGGCCGCACGACGCTCGAGGACGTCACCGATTCCGACGGCACGCTGCTCGCGCCGGTCGGAACGCTGCTCGACGAAGCCACGGTCGCGAAGATCGAGGAGGCCGAGGTTCAGGCGGTCAAGATTCGCAGCCCGCTCGTTTGCGAAGCGGCGCTGGGCGTCTGCGCCAAATGCTATGGCCGCGACCTCGCGCGCGGCACGCCGGTGAACATCGGTGAAGCGGTCGGCGTCATCGCGGCGCAGTCGATCGGCGAGCCGGGCACGCAGCTCACGATGCGGACCTTTCACATCGGCGGCGCGGCGCAGGTCAACGAACAGTCGAACCTGGAGGCGATCTCCGACGGCACGATCGAATATCGCGACATGGAAACGATCGTCGATCAGCGCGGCCGCCGTCTGGCGCTGTCGCGTTCGGGCGAGATCGCGGTCATCGACCCCGAGGGCCGCGAGCGCGCGACCCATCGCCTGCCCTATGGTGCGCAGATCATGCACAAGGACGGCGAAAAGGTGAAGAAGGGCGACCGGATCGCCGAATGGGATCCGTTCACCATGCCGCTGATCACCGAAAAGAACGGTGTCGTGAAGTATCAGGACCTGATCGACGGCAAGACGCTGGCCGAACAGGTCGACGAGGCGACCGGCATCGCGCAGCGCGTCGTCATCGAATATCGCGCCACGGGCCGCGGCAAGAAGGAAGAGCTCCAGCCGCGGCTGACCCTGCTCGATGAGACGAGCGGCGAAGCGGCGCGCTACCTGCTCGCGGTCGGCACGATGATCTCGGTCGACGACGGGCAGGACGTGAAGGCGGGCGACGTGCTGGCGCGCGTCACGCGCGAAGCGTCGAAGACGCGCGACATCACCGGCGGTCTGCCGCGCGTCGCCGAACTGTTCGAGGCGCGCATCCCCAAGGATAATTCGGTGATCGCCAAGATCAGCGGCCGCATCGAATTCGTCAAGGATTACAAGGCGAAGCGCAAGATCGCGATCGTTCCGGAAGAAGGCGATCCGGTCGAATATCTGATCCCCAAGTCGAAGGTGCTCGAGGTGCAGGAAGGCGACTATGTGAAGCGCGGCGACGCGCTGATCAGCGGCTCGCCCAACCCGCACGACATCCTCGACGTCATGGGGGTCGAGGCACTGGCCGAGTTCCTCGTCGCGGAGATCCAGGAAGTCTATCGACTCCAGGGCGTGAAGATCAACGACAAGCACATCGAGGTGATCGTCCGCCAGATGCTGCAGAAGGTCGAGATCACCGACGGCGGCGACACCACGCTGCTGCCGGGCGAGCAGCTCGATTATCTGGAGATGATGGAATATAACGCCAAGCTGCCCAAGAACGGCAAGCCTGCCGAGGGCCGCCCGGTCCTCCTCGGTATCACCAAGGCGAGCCTGCAGACGCGCAGCTTCGTCTCGGCGGCGTCCTTCCAGGAAACGACCCGCGTCCTCACCGAAGCATCGGTGCAGGGCAAGGTCGACTCGCTGATGGGCCTCAAGGAGAATGTCATCGTCGGCCGCCTGATCCCGGCGGGCACCGGCGCGGCGATGAACCGCGTCCGCGTCACCGCTTCGTCGAAGGACGCCGCGCTGCGCGCCGCCATG
PROTEIN sequence
Length: 1128
LEVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIVRNEKRMLQEAVDALFDNGRRGRTITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTGPELKLHQCGLPKKMALELFKPFIYARLDAKGLSMTLKQAKKWVEKERKEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILSPANGKPIIVPSQDMVLGLYYLSMEREGEPGEGMLLADMAEVHQALYTGAVTLHTRVISRVPQTDEQGNSYLKRFETTPGRMLIGECLPKSHTVPFDVVNRLLTKKEIGDVIDQVYRHTGQKETVLFADAIMALGFRHAFRAGISFGKDDMIIPAAKEKLVDETRALVKDFEQQYQDGLITQQEKYNKAIDAWSQCGDKVANAMMDEIRATPKLDDGRLAPINSIYMMAHSGARGSQAQMKQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVSQDCVVIEEDCGTDRGMEMRAIVQGGSVIASLGERILGRTTLEDVTDSDGTLLAPVGTLLDEATVAKIEEAEVQAVKIRSPLVCEAALGVCAKCYGRDLARGTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQVNEQSNLEAISDGTIEYRDMETIVDQRGRRLALSRSGEIAVIDPEGRERATHRLPYGAQIMHKDGEKVKKGDRIAEWDPFTMPLITEKNGVVKYQDLIDGKTLAEQVDEATGIAQRVVIEYRATGRGKKEELQPRLTLLDETSGEAARYLLAVGTMISVDDGQDVKAGDVLARVTREASKTRDITGGLPRVAELFEARIPKDNSVIAKISGRIEFVKDYKAKRKIAIVPEEGDPVEYLIPKSKVLEVQEGDYVKRGDALISGSPNPHDILDVMGVEALAEFLVAEIQEVYRLQGVKINDKHIEVIVRQMLQKVEITDGGDTTLLPGEQLDYLEMMEYNAKLPKNGKPAEGRPVLLGITKASLQTRSFVSAASFQETTRVLTEASVQGKVDSLMGLKENVIVGRLIPAGTGAAMNRVRVTASSKDAALRAAM