ggKbase home page

scnpilot_solids1_trim150_scaffold_7874_3

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingopyxis_68_7

partial RP 31 / 55 MC: 1 BSCG 33 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: 1136..1948

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 270.0
  • Bit_score: 510
  • Evalue 1.90e-141
formamidopyrimidine-DNA glycosylase; K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 270.0
  • Bit_score: 482
  • Evalue 9.40e-134
  • rbh
Formamidopyrimidine-DNA glycosylase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VZC1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 270.0
  • Bit_score: 510
  • Evalue 1.30e-141
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 813
ATGCCCGAACTTCCCGAAGTCGAAACCACCGTCCGCGGTCTGGCGCCCTTCCTCGAAGGGCAGCGGCTGGCGACGGTGACGACCTTTCGTCCCGACCTGCGCCGCCCCTTCCCGGCCGACCTCGCGCAGCGGTTGACCGGCGCGACGGTGACGGGCCTGTCGCGGCGCGCCAAATACGGCATCGTGTCGACCGATCGCGACGACCACATGATCTTCCATCTCGGCATGTCCGGACGCTGGCGCACCGAGGGCGGCGAGGCGGGCAAGCACGACCATCTGCTCCTCGAAACCGGTGCGGGGCAGCGGTTGTTCCTTCACGATCCGCGCCGGTTCGGTTCGGTCGACCTGGTGGCGGGCGACCCGCTGACGCGCTTTCCGGCCTTCGTCACGCTGGGCCCGGAACCGCTGTCCGACGCGTTCGACGCCGCTTATCTCGCCAAGGCGCTCGCGGGGCGCCGGGCGCCGATCAAGGCGATGCTGCTCGACCAGACGGTCGTCGCCGGGCTCGGTAACATCTATGTCTGCGAGGCGCTCAACATGGCGCGGATCGCGCCGACGCGCGCCGCGGCCGACGTGCCCAAGGCGAAGCTCGCCGCGCTCGTGCCCGCGATCAAGGCGGTGCTTCTCGCCGCCATCGCGGCGGGCGGCTCGACGCTGCGCGATTTCCTGAGCCCCGAAGGCGATCTCGGCTATTTCGCGAAGGACTGGCGCGTCTATGGGCGCGAGGGCGAGCGATGCGAATGCGGCGGCACCATCGCGCGCATCGTGCAGAGCGGCCGGTCGACCTTTCATTGCCCGAAATGCCAGCGCTGA
PROTEIN sequence
Length: 271
MPELPEVETTVRGLAPFLEGQRLATVTTFRPDLRRPFPADLAQRLTGATVTGLSRRAKYGIVSTDRDDHMIFHLGMSGRWRTEGGEAGKHDHLLLETGAGQRLFLHDPRRFGSVDLVAGDPLTRFPAFVTLGPEPLSDAFDAAYLAKALAGRRAPIKAMLLDQTVVAGLGNIYVCEALNMARIAPTRAAADVPKAKLAALVPAIKAVLLAAIAAGGSTLRDFLSPEGDLGYFAKDWRVYGREGERCECGGTIARIVQSGRSTFHCPKCQR*