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scnpilot_solids1_trim150_scaffold_15387_2

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingopyxis_68_7

partial RP 31 / 55 MC: 1 BSCG 33 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: 514..1125

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GRC8_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 199.0
  • Bit_score: 343
  • Evalue 1.60e-91
  • rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KGB56468.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 201.0
  • Bit_score: 354
  • Evalue 1.30e-94
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 86.9
  • Coverage: 199.0
  • Bit_score: 343
  • Evalue 5.10e-92
  • rbh

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Taxonomy

Sphingopyxis sp. LC363 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
GTGGTGTCAATAGCAAAGAAGCGACTGAGCCCGGAGGAGAGCCGGTCGGTCGCATTGGAAGCAGCCCGTCAGATATTGATCGAACTGGGGCCGCAGGCGGTGACGCTGAAGGCGGTGGCGGGACGCATCGACCGCACCCACGCCAATCTGCTCCACCATTTCGGCAGCGCGGCAGGCCTGCAAAAGGCCTTGGCCGCCTATCTGGCCGAAACGGTGTGCGACACGATCGCCGCAAAGATGACCGCCTCGCCGCCGGGCGAACGCAACGTGCGCGAGATCGTCGACCTCGCCTTCGACGCTTTCGACAGCGGCGGCGCGGGGGCGTTGGCGACGTGGATGGCGGCGACCGGCAACGACGATTCGCTCGACCCGATCATCGCCGCGATCCACCGGCTGATCGACGGCATGGCCCCCGACGCGCACGAAAAGCGCCTGATGCACGAGGACACACTCGCGCTGGTACTGATGGCGATGGGCGACGCGCACCTCGGCGGCCCGATGGCCGAGGCGCTGGGCCTGCCGCGCGACACCGCGCGCGCGCTGGCGACCGAACTGATCGCCGGGCGGATCGGAACCTTCTGGGCCGAACAGGGCGGGAAGCCGGGCTGCTGA
PROTEIN sequence
Length: 204
VVSIAKKRLSPEESRSVALEAARQILIELGPQAVTLKAVAGRIDRTHANLLHHFGSAAGLQKALAAYLAETVCDTIAAKMTASPPGERNVREIVDLAFDAFDSGGAGALATWMAATGNDDSLDPIIAAIHRLIDGMAPDAHEKRLMHEDTLALVLMAMGDAHLGGPMAEALGLPRDTARALATELIAGRIGTFWAEQGGKPGC*