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scnpilot_solids1_trim150_scaffold_9100_1

Organism: SCNPILOT_SOLID_1_TRIM150_Micrococcales_69_5

partial RP 26 / 55 MC: 1 BSCG 26 / 51 MC: 2 ASCG 9 / 38
Location: 3..809

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 268.0
  • Bit_score: 491
  • Evalue 8.90e-136
rpoC; DNA-directed RNA polymerase, beta' subunit/160 kD subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 268.0
  • Bit_score: 488
  • Evalue 1.30e-135
DNA-directed RNA polymerase subunit beta' n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF84_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 268.0
  • Bit_score: 488
  • Evalue 4.10e-135

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 807
ACCCCGAAGGGTGCGTCGCCGATCGCCGAGGCCGACGGCCGCGTCACGATCGACGAGACGGAGAAGACCCGCAAGGTCATCCTCACGCCCGACAATGGCGACGAGCCGCACGTGTACCCGGTGCTCAAGCGCGCGACCCTGCTCGTGGAGGACGGCCAGCACGTGTCGGTCGGCCAGCCGCTGCAGGTGGGCACGCTCGACCCGAAGGAGATCATGCGCGTGCAAGGCGCCCGCGAGGTGCAGAAGTACCTCGTCGGTGGCGTGCAGGGCGTGTACCGCTCGCAGGGCGTGCCGATCCACGACAAGCACATCGAGGTCATCGTGCGCCAGATGCTGCGCAAGGTCACCGTCGTCGATCACGGCGAGACCACGCTGCTGCCCGGCGAGCTGGTGGACTCGCGCCGGTTCATCGACATCAACCGGGCGTCGGTGGGCGAGGGCAAGCGCCCCGCCTCAGGCCGTCCCGAGCTGATGGGCATCACGAAGGCGTCGCTGGCGACCGAGTCGTGGCTGTCGGCCGCGTCGTTCCAGGAGACCACGCGTGTGCTCACGCAGGCCGCCATGGAGGCGAAGTCCGACCCGCTGCTCGGCCTCAAGGAGAACGTGATCATCGGAAAGCTGATCCCCGCCGGAACCGGACTGCCCAAGTACCGGAGCGTGGTGGTGGAGGCGACCGAAGAGGCCAAGAGCGAGCGGTACCCCAACCGCATCTTCGCCTCAGATGGCGCCTACAGCGATGCCGACCTGAGTTACGTCGACTTCGACAGTTTCTCGACGGACGACTACACGCCCGGGTCGTACAACTGA
PROTEIN sequence
Length: 269
TPKGASPIAEADGRVTIDETEKTRKVILTPDNGDEPHVYPVLKRATLLVEDGQHVSVGQPLQVGTLDPKEIMRVQGAREVQKYLVGGVQGVYRSQGVPIHDKHIEVIVRQMLRKVTVVDHGETTLLPGELVDSRRFIDINRASVGEGKRPASGRPELMGITKASLATESWLSAASFQETTRVLTQAAMEAKSDPLLGLKENVIIGKLIPAGTGLPKYRSVVVEATEEAKSERYPNRIFASDGAYSDADLSYVDFDSFSTDDYTPGSYN*