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scnpilot_solids1_trim150_scaffold_35792_2

Organism: SCNPILOT_SOLID_1_TRIM150_Micrococcales_69_5

partial RP 26 / 55 MC: 1 BSCG 26 / 51 MC: 2 ASCG 9 / 38
Location: comp(482..1156)

Top 3 Functional Annotations

Value Algorithm Source
Putative tetracycline repressor protein n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RBY9_CLAMS similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 222.0
  • Bit_score: 239
  • Evalue 3.70e-60
tetR; tetracycline repressor protein similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 222.0
  • Bit_score: 239
  • Evalue 1.10e-60
Putative tetracycline repressor protein {ECO:0000313|EMBL:CAQ01717.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 222.0
  • Bit_score: 239
  • Evalue 5.10e-60

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 675
CGGGATCCTTACCTGAACGATGTTCACCTGAACGCTGTTCACTATAGTGAGGGCATGGCCGAGAAAGAAGCCGGGCGACGTCACACCCGCGATGACGTGGCGCGCACGGCGCTACGGTTGCTCGACGACGTCGGACTGCCCGACGTGACGATGCGCCGGCTGGCCGCCGCTCTCGACGTGCAGCCCAGTGCTCTCTACCACCATTTCCCCAACAAGCAGGCGCTGTTGGCCGAGCTCGCCGATCGCATCGTGGCCGCGCCGGTTGCCGTGGCCGCGCCCGTGCACGACCCGTGGGCGCAAGACCGGGCGATCCCGGCGTGGGAGTCGGATGTCCGCTGGGAGGCGGCGCTGCTGCGCGACCGGATGCTCGCATATCGCGACGGCGCCGAGGTGGTCTCCAGCACGCTCAGCATGGGTCTGGGGGCGGATGCCGCCCTCGACGGGCTCGCCCGCGCGGTGGCAGGAGGCGGATTCGACGCGTCGACGACACGGCGGGCCGCGACGGCGCTGCTGCACTTCGTGCTGGGCCATGTCTCGCACGAGCAGCAGCGGTTGCAGTACGACAGCCTCGGTGTCGTCGCTCCCGGTCTTGCCGACGACGACGGCGCCGCCGCGTTCGCGTTCGGCGTCGCCCTTCTGGTGGAGGGACTACGCGCTCGAGCGCCGATCGTGTGA
PROTEIN sequence
Length: 225
RDPYLNDVHLNAVHYSEGMAEKEAGRRHTRDDVARTALRLLDDVGLPDVTMRRLAAALDVQPSALYHHFPNKQALLAELADRIVAAPVAVAAPVHDPWAQDRAIPAWESDVRWEAALLRDRMLAYRDGAEVVSSTLSMGLGADAALDGLARAVAGGGFDASTTRRAATALLHFVLGHVSHEQQRLQYDSLGVVAPGLADDDGAAAFAFGVALLVEGLRARAPIV*