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scnpilot_solids1_trim150_scaffold_27398_1

Organism: SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_40_4

partial RP 15 / 55 BSCG 13 / 51 ASCG 2 / 38
Location: 3..602

Top 3 Functional Annotations

Value Algorithm Source
tetracycline resistance element mobilization regulatory protein RteC n=1 Tax=Empedobacter brevis RepID=UPI00038078E3 similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 198.0
  • Bit_score: 187
  • Evalue 1.10e-44
Tetracycline regulation of excision, RteC {ECO:0000313|EMBL:KGD66914.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.7
  • Coverage: 197.0
  • Bit_score: 188
  • Evalue 1.20e-44
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 198.0
  • Bit_score: 187
  • Evalue 4.60e-45

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Taxonomy

Flavobacterium aquatile → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 600
GAGATTAACCGGCCAACCGGGAGCGACACAGTTCAACGGAAATATCTGAAAACGCATTTGCACCGCATAACTCATTTTTTTGAAAACAATCTTGATTTCTACCAGTATTACCGGAGTGGCTCCACTCATTTTGACGAGGTATATTTCATCCGCGGTAAACATGACTTGCGGTTATTCCCTGATGATCTTGCCCTGACTATCGACCCTGCCTTCTGTACCACGCAAAGCTATAAAGTGTCCAAACTGTTCGCCAATGAACTTCTCCGTATCTACCTGAATGCAGCGATCACGTTGCTTGACCGGACGGACGCAATAGTACCCGCGCAACCCGCTAAGCAACAACGTGTACAGTGGACTGGTTCGAAGGTGGCATTGATTGAACTTATCTATGCGCTGCAAAGCGCAGGCATCTTTAATAATGGATCAGCCGATATCAAGCAACTCAGTAGCTATCTCGAAGGTGTCTTCCAGGTGGAACTGGGCAATGTGTATAATGTTTTCCAGGAAATGCGTATTCGAAAAAAAAACCGGACTTCCTTTCTTGATTTGCTGAAGGAGGGATTGTTGAGGCGGATGGATGAAGCCGATGAATCGTATTGA
PROTEIN sequence
Length: 200
EINRPTGSDTVQRKYLKTHLHRITHFFENNLDFYQYYRSGSTHFDEVYFIRGKHDLRLFPDDLALTIDPAFCTTQSYKVSKLFANELLRIYLNAAITLLDRTDAIVPAQPAKQQRVQWTGSKVALIELIYALQSAGIFNNGSADIKQLSSYLEGVFQVELGNVYNVFQEMRIRKKNRTSFLDLLKEGLLRRMDEADESY*