ggKbase home page

scnpilot_solids1_trim150_scaffold_108_9

Organism: SCNPILOT_SOLID_1_TRIM150_Plasmid_2

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(4732..5394)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MM21_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 105.0
  • Bit_score: 108
  • Evalue 9.50e-21
Uncharacterized protein {ECO:0000313|EMBL:CCW16538.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 105.0
  • Bit_score: 108
  • Evalue 1.30e-20
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 109.0
  • Bit_score: 104
  • Evalue 4.30e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGAAGACATCATTGCGCCCTGACCGCTGTTCATGTGGAGGGTGGATCGCGGTTACGGCGCGGCGGGACAAGGCAGGGGGCACCGTGCTGCCCATAGCAGGCAGGAGAGTGCAAAGCGGGTCCGCCGATGAGCGCGCCATTTCTAAACGGAGCGGGATCCGGGTGATCCCAATCTGGCGACAAGCTGAACGAAACTTTCGGTTTGCAAGCAGTTCCCGTTGCCCGGCTCACGATGGCCGATCAGCATTGCACCTGCCGAACGCAGTCAATGCTTGGCCATTTCGGGCAGGAATTAAAATGACAATCGTAACCACCAGTCACGATGCATTGCTGGCGCAACTGAAGGAATCTTCAGGTCGACGGATTGAGGGAGAACGACGACGTCAATTCCTCTCGCAACGACAGTTCGCAGCGCGGGTCGGTATTAGCATTCGGTGGCTGCGCGAAATTGAGAGTGGCAATCCGGCCGTGAAGTTGGAGGATCACTTACGCTGCGGGGCGGCGCTGGGTCTCGCGCCAAGCCACATTTTTTTCCCACTGCTTTTTCACGCGCACGGCAAGCCTTTGTCGGCTGATCCGCCACATCACAATCAGGCTGATCTCGAGTATCGCTGTATCCGTCTGATCGCGCGGCACACACAGGGAAGGCGAACAACACCTTGA
PROTEIN sequence
Length: 221
MKTSLRPDRCSCGGWIAVTARRDKAGGTVLPIAGRRVQSGSADERAISKRSGIRVIPIWRQAERNFRFASSSRCPAHDGRSALHLPNAVNAWPFRAGIKMTIVTTSHDALLAQLKESSGRRIEGERRRQFLSQRQFAARVGISIRWLREIESGNPAVKLEDHLRCGAALGLAPSHIFFPLLFHAHGKPLSADPPHHNQADLEYRCIRLIARHTQGRRTTP*