ggKbase home page

scnpilot_solids2_trim150_scaffold_1756_18

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(12436..13239)

Top 3 Functional Annotations

Value Algorithm Source
DNA/RNA helicase, superfamily II (EC:5.99.1.-) similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 274.0
  • Bit_score: 466
  • Evalue 6.90e-129
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 274.0
  • Bit_score: 466
  • Evalue 3.10e-128
ATP-dependent RNA helicase DeaD n=1 Tax=Rhodanobacter denitrificans RepID=I4WTI2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 274.0
  • Bit_score: 469
  • Evalue 2.60e-129

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 804
TTCGTCAGCCCGCGCGAGCGCGGCATGCTGCACGCGATCGAGCGCGCCACCCGCCAGCCGATCGAGCAGATGCAGCTGCCGTCGGTCGAGGTGGTCAATGATGTACGCATCGGCAAGTTCAAGCAGCGCATCAGCGACATGCTGGCGCAGGGCGACCTCGGCCAGTTCCAGCAGCTGATCGAGCAGTACGAGCAGGAACACAACGTGCCGGCGGTCGAGATCGCCGCCGCGCTGGCGCGCATCGCCCAGGGCGACCAACCGCTGCTGCTGGCGCCGCCGCCCAAGCGCGAGAAGTACGAGCCGGCCACGCGCGAACACAAGCCGCGCGAGCGCGACGGTGCCAGCCGCACGGCCCGCGAGCACAAGCCGCGCAGTCACGAGGGCGCGCCACCGCGCGAGTTCGCGGCGCGCCCGCTGCGCGCGCATGCCACCGAACAAGGCAAGCGCACCTACCGCATCGAAGTCGGCCACGAGCATGGCGTCAAGCCGGGCAACATCATCGGCGCGATCGCCAACGAGGCAGGACTGGACAGCCAGTACATCGGCCGCCTCAGCATCCGCGACCACTACAGCCTGATCGACCTGCCCGACGGCATGCCGAAGGAAATCTTCGAGCACCTGAAGAAGGTGTGGGTGGTGCAGCAGCAGTTGCGCATCCACGAGTGGGACGGCAACGACACCGGCTCAGCGGCACCGCCCGCACACCACGCCACCAGCCACAAGCCGGGCGGCCACAAACCCGGCGGATTCAGGCCAGGCGGCGCCAAGCCACGCACAGGCAGCAAGCCACCACCGCGCAAATAA
PROTEIN sequence
Length: 268
FVSPRERGMLHAIERATRQPIEQMQLPSVEVVNDVRIGKFKQRISDMLAQGDLGQFQQLIEQYEQEHNVPAVEIAAALARIAQGDQPLLLAPPPKREKYEPATREHKPRERDGASRTAREHKPRSHEGAPPREFAARPLRAHATEQGKRTYRIEVGHEHGVKPGNIIGAIANEAGLDSQYIGRLSIRDHYSLIDLPDGMPKEIFEHLKKVWVVQQQLRIHEWDGNDTGSAAPPAHHATSHKPGGHKPGGFRPGGAKPRTGSKPPPRK*