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scnpilot_solids2_trim150_scaffold_6747_1

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 2..1042

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase RhlB {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011806}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011808};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 358.0
  • Bit_score: 534
  • Evalue 1.20e-148
ATP-dependent RNA helicase RhlB n=2 Tax=Rhodanobacter denitrificans RepID=M4NKJ1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 358.0
  • Bit_score: 534
  • Evalue 8.50e-149
DNA/RNA helicase, superfamily II similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 358.0
  • Bit_score: 534
  • Evalue 2.70e-149

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
GACAAGGTGCGCCAGGTGGTCTACTTCCCGGCCAAGGAAGAGAAGATGCCGCTGCTGCTGAACCTGATCGACCAGCACAAGCCCACGCGCAGCATCATCTTCGTCAACACCAAGGCCGCCGCCGAGCGCGTCACCGAGCGCGTCAAGCGTCACGGCTGCCGCGTCGGCGCGATCTCCGGCGACGTGCCGCAGCTGAAGCGGCAGAAGCTGCTGCAGCGCTTCCAGGAGGGCCAGCTGGACATCCTGGTGGCCACCGACGTGGCTGCGCGCGGCCTGCACATCCCGCATGTCAGCCACGTGTTCAACTACGACCTGCCGCACGAGGCCGAGGATTACGTGCACCGCATCGGCCGCACCGCGCGGCTGGGCGCCGAGGGCGACGCGATCAGCTTCGCCTGCGACCTGTACGCGATGTCGCTGCCGGACATCGAGGCCTATATCGGCCAGAGCATCCCGGTGGCGTCGATCGACCCTGCCTGGCTGGTGATGCCCAAGCCGCATGCCGTGGACGCGGAGTTCGCCGCGAACGCGGCGGCCGACAGCGCGGCGTTCGGCGACGTGGTCCCGCCGCGGCCGGGCGAGAAGCCGCGCCGTACCGGTGCGGGCGGCCGCGGTGGTCGTGACGGTGAGCGTGGCGCGTCGAGGCCGCGGCGCGAACACAAGCCGGCCGTGGCGGAAGCGCCGGCCGTGGCGGTCGCCGCGGCGGCGCCTGCCGCCGAGGCTGCACCGGCCAGCGACAACACCGAGGGCACGCGCAAGCCGCGTCGCCGTCGCGGCGGACGCAATCGCCGCCGCGACGGCGCGCCGGTGGCCGGCGCCGAGGTGACCACGCCGACGCAGGCAGCGCCTTCGGGCCACCACGGCGGTCGCGGCGAACGCCGTCCGCCGCGCGAGCGCACCGCGGGCGAAGCGTCCGCCGCCGTCCACCACGCCCGCCCGTCGCGCCAGGTGGCGGTGACCTCCGGCAAGGCGGTCGAGCATGCGCGTCCGGACAAGCCCGGCCTGTTCCGCCGACTGACCCGGCTGTTCACCGGCAAGTAG
PROTEIN sequence
Length: 347
DKVRQVVYFPAKEEKMPLLLNLIDQHKPTRSIIFVNTKAAAERVTERVKRHGCRVGAISGDVPQLKRQKLLQRFQEGQLDILVATDVAARGLHIPHVSHVFNYDLPHEAEDYVHRIGRTARLGAEGDAISFACDLYAMSLPDIEAYIGQSIPVASIDPAWLVMPKPHAVDAEFAANAAADSAAFGDVVPPRPGEKPRRTGAGGRGGRDGERGASRPRREHKPAVAEAPAVAVAAAAPAAEAAPASDNTEGTRKPRRRRGGRNRRRDGAPVAGAEVTTPTQAAPSGHHGGRGERRPPRERTAGEASAAVHHARPSRQVAVTSGKAVEHARPDKPGLFRRLTRLFTGK*