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scnpilot_solids2_trim150_scaffold_5248_4

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 2485..2763

Top 3 Functional Annotations

Value Algorithm Source
Factor for inversion stimulation Fis, transcriptional activator n=2 Tax=Rhodanobacter denitrificans RepID=M4NCL9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 96.0
  • Bit_score: 139
  • Evalue 2.10e-30
Factor for inversion stimulation Fis, transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 96.0
  • Bit_score: 139
  • Evalue 6.70e-31
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 96.0
  • Bit_score: 142
  • Evalue 2.70e-31

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 279
GTGAATGCCGCCAGACTGCCTGCCGCCGAGGCTGCCGTATCGACCTCGTCGCAAGCTGCGCTTGCGCACGGCTCCGGCAGCGCACTGAGTGAGTGCGTCAGCCGCACGGTGCGACGCTATCTGGCCGACATCGGCGACACCGAATGTGCCGAGGGCCTGCACGCGCTGGTGCTGCACGAAGTCGAAGTGCCGCTGCTGCGCGAGGTGCTGGCCTTCCACGGCGGCAACCAGAGCCGCGCCGCCGTGGCGCTGGGCATCAATCGCGCCACGCTGCGTTGA
PROTEIN sequence
Length: 93
VNAARLPAAEAAVSTSSQAALAHGSGSALSECVSRTVRRYLADIGDTECAEGLHALVLHEVEVPLLREVLAFHGGNQSRAAVALGINRATLR*