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scnpilot_solids2_trim150_scaffold_3639_2

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 1641..2171

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Y9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 167.0
  • Bit_score: 271
  • Evalue 5.20e-70
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:EIL95230.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 167.0
  • Bit_score: 271
  • Evalue 7.30e-70
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 163.0
  • Bit_score: 123
  • Evalue 7.20e-26

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGACGGGGACCGGATCATCCTTTGCCGAAGGTTCGACGGACGCCCTGTTCGCCGAGGTCTACGCGCGCCTCAAGGCGATGGCCGCCCGGCAATTGAATCGACGCCAGGGCGCCACGCTGGACACCACCGAGCTGGTGCACGAGCTGTACCTGCGCATCGGCCAGAACGAGGCACTGCACTTCGAACACCCGGCGCAGTTCTTCAGTTACGCCGCGCGCGCCATGCGCCACCTGCTGACCAACCGCGCCCGCGACCGGCTGCGCCTGCGCGCCGGCGGTCAATGGATGAAGGTCACCTTGGACGAGGACGATGTCCGGCTCGCGCTGGATACGGCCGCCCAGGCGCTGACGCTGGATGCCGCGCTGAACGCGCTGGAACAGACCGATGCGCGCGCCGCCCGAGTGGTGGAGCTGCACTATTTCGCCGGGCTGGGCCTGCAGCAGATCGCCGACACCCTCGGCCTGGCGCGGCGCACGATCGACCGCGACTGGCGCTTCGCCCGCGCCTTCCTCAAGGCGCACATGGACTGA
PROTEIN sequence
Length: 177
MTGTGSSFAEGSTDALFAEVYARLKAMAARQLNRRQGATLDTTELVHELYLRIGQNEALHFEHPAQFFSYAARAMRHLLTNRARDRLRLRAGGQWMKVTLDEDDVRLALDTAAQALTLDAALNALEQTDARAARVVELHYFAGLGLQQIADTLGLARRTIDRDWRFARAFLKAHMD*