ggKbase home page

scnpilot_solids2_trim150_scaffold_6075_6

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(3667..4335)

Top 3 Functional Annotations

Value Algorithm Source
Putative cation efflux protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP21_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 201.0
  • Bit_score: 377
  • Evalue 8.50e-102
Putative cation efflux protein {ECO:0000313|EMBL:EIM01213.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 201.0
  • Bit_score: 377
  • Evalue 1.20e-101
putative cation efflux protein; K03295 cation efflux system protein, CDF family similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 201.0
  • Bit_score: 306
  • Evalue 5.80e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGAGTGCCGGGCACAATCACGTGGGTACGGGAGTCAAGCACGAGACACCCCTGTGGTGGGCACTCGGCCTGACCGGTATGTTCCTCATCGCCGAGGTTATCGGCGGTTTGCTTACCAACAGTTTGGCTTTGTTGTCGGATGCGGCACATATGGCCACCGATGTGATCGCGCTGACGATCTCGCTGGCCGCCGTGCGGCTGGCCCGACGCCCACCCGACGCGAAACGCACCTTTGGCTACGCGCGCATGGAAGCCATCGGCGCACTCGTCAACGGTGGCCTGCTGTTCCTTGTCGCCGGCTACATCTTGTGGGAGGCGGTGCGGCGCTTCAGCGAACCGCCGTCGGTGGCCTCCACCGGCATGCTGGTGATCGCGGTGCTTGGGCTGGTGATCAACCTCATCTCGATGCGATTGCTCAAGGCCGGTAGCGGTGAAAGCCTCAATGTGAAAGGTGCGTATATGGAAGTTTGGGCCGACATGCTCGGTTCGGTTGGCGTCATCATCGGTGCGTTGATCATCAAGTTCACCGGCTTCTACATTGCCGACCCCATCATCGCGGTGTTGATCGGCCTATGGGTATTGCCGCGGACATGGGTCCTGCTGTCCGCGCCGAAATGCTCGCCACTGCGGGCGTGGCTGCGCTGCACGATGTGCACGTATGGGCGCTGA
PROTEIN sequence
Length: 223
MSAGHNHVGTGVKHETPLWWALGLTGMFLIAEVIGGLLTNSLALLSDAAHMATDVIALTISLAAVRLARRPPDAKRTFGYARMEAIGALVNGGLLFLVAGYILWEAVRRFSEPPSVASTGMLVIAVLGLVINLISMRLLKAGSGESLNVKGAYMEVWADMLGSVGVIIGALIIKFTGFYIADPIIAVLIGLWVLPRTWVLLSAPKCSPLRAWLRCTMCTYGR*