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scnpilot_solids2_trim150_scaffold_7303_5

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 2184..2996

Top 3 Functional Annotations

Value Algorithm Source
Twitching motility protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGE1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 271.0
  • Bit_score: 519
  • Evalue 2.20e-144
Twitching motility protein {ECO:0000313|EMBL:EIL98532.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 271.0
  • Bit_score: 519
  • Evalue 3.10e-144
pilus retraction protein PilT similarity KEGG
DB: KEGG
  • Identity: 96.7
  • Coverage: 271.0
  • Bit_score: 517
  • Evalue 2.60e-144

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 813
GTGGACATCGGCTACTTCCTCAAGCTCATGGTAGACAAGGGCGCGTCGGACATGTTCCTGTCCACCGGTGCCCCGGTGAACATCAAGGTCGAGGGCAAGCTTTATCCGCTGGGCAATACCGGCCTGCCGAGCGGCATGGTCAAGAAGATCGCCTATTCGCTGATGGACGAGGGCCAAGTGCCGCAGTTCGAGCGCAACCTCGAACTGAACATGGCATTGGCGGTGAAGGAAGCCGGCCGCTTCCGCATCAACGTCTTCAAGCAGCGCGGCGAAGTGGGCATGGTGATCCGCGCGATCAAGAGCGAGATCCCCTCGATCGAGCAGCTGCAGCTGCCGCCGATCTTCCGCGACCTGATCATGGAGCCGCGCGGACTGATCCTGGTGGTGGGCGCCACCGGCTCGGGCAAGTCGACCACGCTGGCGGCGATGATCGACCAGCGCAACTCGCAGTCGCCCGGGCACATCCTCACCATCGAGGACCCGATCGAATACCTGCACCGGCACAAGCGCTCGATCGTCAACCAGCGTGAGGTCGGGCTGGACACGCACAGCTACCACGAGGCGCTGAAGAACGCGATGCGCGAGGCGCCGGACGTCATCATGATCGGCGAGATCCGCGACACCGACACGATGGAGGCGGCCATTGCCTTCTCCGAGACCGGCCACCTTTGCCTGGCCACGCTGCACTCCAACAACTCCGACCAGACGCTGGAGCGCATCCTCAACTTCTTCCCCGAATCGGCGCACAAGAACGTGCTGATGAACCTGGCGCTGAACCTGCGCGCGGTGATCAGCCAGCGCCTGGTGATCGGC
PROTEIN sequence
Length: 271
VDIGYFLKLMVDKGASDMFLSTGAPVNIKVEGKLYPLGNTGLPSGMVKKIAYSLMDEGQVPQFERNLELNMALAVKEAGRFRINVFKQRGEVGMVIRAIKSEIPSIEQLQLPPIFRDLIMEPRGLILVVGATGSGKSTTLAAMIDQRNSQSPGHILTIEDPIEYLHRHKRSIVNQREVGLDTHSYHEALKNAMREAPDVIMIGEIRDTDTMEAAIAFSETGHLCLATLHSNNSDQTLERILNFFPESAHKNVLMNLALNLRAVISQRLVIG