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scnpilot_solids2_trim150_scaffold_7386_7

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(4074..4283)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein n=2 Tax=Rhodanobacter RepID=I4WY71_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 69.0
  • Bit_score: 139
  • Evalue 1.60e-30
cold shock protein similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 69.0
  • Bit_score: 139
  • Evalue 5.00e-31
Cold shock protein {ECO:0000313|EMBL:EIM03068.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 69.0
  • Bit_score: 139
  • Evalue 2.20e-30

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGTCGGATCGTGAAACGGGTACAGTCAAGTGGTTCAACGACGCCAAGGGCTTCGGCTTCATCAGCCGTGAAAGCGGCCCCGACGTGTTCGTGCATTTCCGCGCCATCACTGGTTCGGGATTCAAGAGCCTGCAGGAAGGACAGAAGGTGACCTTCAAGGTGGTCGACGGCCAGAAAGGCCTGCAGGCCGAAGACGTCACCCCCGTCTGA
PROTEIN sequence
Length: 70
MSDRETGTVKWFNDAKGFGFISRESGPDVFVHFRAITGSGFKSLQEGQKVTFKVVDGQKGLQAEDVTPV*