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scnpilot_solids2_trim150_scaffold_7008_3

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(1635..1934)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit beta n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIA0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 99.0
  • Bit_score: 196
  • Evalue 1.20e-47
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 99.0
  • Bit_score: 196
  • Evalue 1.70e-47
integration host factor, beta subunit similarity KEGG
DB: KEGG
  • Identity: 96.0
  • Coverage: 99.0
  • Bit_score: 194
  • Evalue 1.90e-47

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGACTAAATCCGAATTGATCGAGGCGCTCGCCAGGCGCCAGACGCATCTTGCGTTCGCGGACGTCGAGATGGCCGTCAAGAGCATCATCGAGCAGATGAGTCATGCCTTGGCCCATGGCGAACGCATCGAAGTGCGCGGTTTCGGCAGTTTCGCGCTGCACTACCGGCCGCCGCGCATGGGACGCAACCCCAAGACGGGCGAGGCCGTGGCGCTGCCCGGCAAACATGTTCCGCACTTCAAGCCGGGCAAGGAATTGCGCGAGCGCGTCAACCAGGAGCCGGAGCAGAAAACCGCCTGA
PROTEIN sequence
Length: 100
MTKSELIEALARRQTHLAFADVEMAVKSIIEQMSHALAHGERIEVRGFGSFALHYRPPRMGRNPKTGEAVALPGKHVPHFKPGKELRERVNQEPEQKTA*