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scnpilot_solids2_trim150_scaffold_3752_4

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(3190..4101)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6W0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 303.0
  • Bit_score: 470
  • Evalue 1.00e-129
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 303.0
  • Bit_score: 468
  • Evalue 1.60e-129
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 304.0
  • Bit_score: 477
  • Evalue 1.20e-131

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGTTTGATTTCCGCCAGTTGCGCTACTTCGTGGCCGTCGCCGAGGAGCTGAGCTTCACGCGGGCCGCCTTGCGCCTGCATCTTTCGCAGCCGCCCCTGTCGCAGCAGATCAAGTCACTGGAGCAGGATCTGGGCGTGCGCCTGCTGGAGCGGAGCAAACGCCACGTCTCGCTGACGGAACCGGGCCGGGTATTTCTCGAACAGGCCAGGCACCTCCTTGCCAAGGCAGACGAGGCGCGCAGCCAGGTCGTCGCCGCTGCCGCCGGCCACAGCGGCCACCTGCGCCTGGCCTACACCGTGTCGGCATCGTTCCACCCGGCACTGCCGCGAATCCTGCTCCGTTACGGACAAGTGGCGCCCAAGGTGGGACTGAAACTCGACGAGATGTACACCGAGCCGCAATTCGCCGCGCTGCTGGGCGGCGAGATCGACGCCGGCTTCGTCCGTGGCGAGCCGGCGCACCTGCAGGACGCGCGCAACCTGAGACTCAGCGTGATCGACCGCGAGCCGCTGTTGCTTGCCATGCCGGCGGGGCACCGGCTGGCCGGACGCAGCAGCGTCGACCTTGCCGAGGTTGCCAGTGATGCCTTCGTGTCGCAGCCACGTGCGCTCGCCGCGACGCTGTATGACCGCCTGGTGACGCTGGCGCAACACGCCGGGTTCCAGCCCGCCATCGTCCAGCACGCCCAGCAGATCAACGGCTTGCTGGCGCTGGTCGCCGCCGGATTGGGACTGGCGCTGGTGCCGTCCAGCCTGCGGACGGTGCGGCTGCCCGGTGTTGCCTATGTGCCGCTGGAGGACCCGAACGCCTTTCTGCTGCTGGCCGTGGCCTGCCGGACCAACGACCCCTCACCGGCGCTGCAACAGTTCCTGGCCACCGTCACGGAAGTGGCTGTCGCGCCAGGCTTGTGA
PROTEIN sequence
Length: 304
MFDFRQLRYFVAVAEELSFTRAALRLHLSQPPLSQQIKSLEQDLGVRLLERSKRHVSLTEPGRVFLEQARHLLAKADEARSQVVAAAAGHSGHLRLAYTVSASFHPALPRILLRYGQVAPKVGLKLDEMYTEPQFAALLGGEIDAGFVRGEPAHLQDARNLRLSVIDREPLLLAMPAGHRLAGRSSVDLAEVASDAFVSQPRALAATLYDRLVTLAQHAGFQPAIVQHAQQINGLLALVAAGLGLALVPSSLRTVRLPGVAYVPLEDPNAFLLLAVACRTNDPSPALQQFLATVTEVAVAPGL*