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scnpilot_solids2_trim150_scaffold_22340_1

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 2..619

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 205.0
  • Bit_score: 401
  • Evalue 9.30e-109
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 95.1
  • Coverage: 205.0
  • Bit_score: 394
  • Evalue 1.50e-107
DNA-directed RNA polymerase subunit beta n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WL14_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 205.0
  • Bit_score: 401
  • Evalue 6.60e-109

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
GAGATCCGCAAGTTCCTCGACCAGATCTACAACACCCACGTCGCCGGCGCCGTGCAGCACGTCGACCTGAAGTCGCTCACCGACGCCGAGATCCTGGCACTGGCGAACAACCTGCAGGAAGGCGTGCCGATGTCCACGCCGGTGTTCGACGGCGCCGAGGAGACCGAGATCAAGGCGATGCTGAAGCTGGCGGATCTGCCCGAGTCGGGCCAGACCATGTTGTACGACGGCCGTACCGGCGAGGCGTTCGACCGCCCGGTCACCGTGGGCTACATGCATTACCTGAAGCTCAACCACCTGGTCGACGACAAGATGCACGCGCGTTCCACCGGTCCGTACTCGCTGGTCACCCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGCGGCCAGCGCTTCGGCGAGATGGAAGTGTGGGCGCTGGAAGCCTACGGCGCGGCCTACACCTTGCAGGAAATGCTGACGGTGAAGTCCGACGACGTGCAGGGTCGCAACCAGATGTACAAGAACATCGTCGACGGCAACCACGAAATGTCCGCGGGCATGCCGGAGTCCTTCAACGTGCTGGTGAAGGAAATCCGCTCGCTCGCCATCGACATCGATCTGGAAGAGGTCAAGTGA
PROTEIN sequence
Length: 206
EIRKFLDQIYNTHVAGAVQHVDLKSLTDAEILALANNLQEGVPMSTPVFDGAEETEIKAMLKLADLPESGQTMLYDGRTGEAFDRPVTVGYMHYLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVQGRNQMYKNIVDGNHEMSAGMPESFNVLVKEIRSLAIDIDLEEVK*