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scnpilot_solids2_trim150_scaffold_1570_1

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_69_103

partial RP 27 / 55 MC: 1 BSCG 30 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: 1..1185

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator superfamily protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFE3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 394.0
  • Bit_score: 703
  • Evalue 1.20e-199
Major facilitator superfamily protein {ECO:0000313|EMBL:EIL98184.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 394.0
  • Bit_score: 703
  • Evalue 1.70e-199
arabinose efflux permease family protein similarity KEGG
DB: KEGG
  • Identity: 91.6
  • Coverage: 394.0
  • Bit_score: 684
  • Evalue 1.80e-194

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1185
CGGATCCCGGCCGGCATCTGGGCGCTGGGCATGGTCTCGCTGCTGATGGATACCTCCTCGGAGATGATCCATGCGCTGCTGCCGGTGTACCTGGTCAGCGTGCTTGGCGCCTCGGCGCTGGCGGTGGGCTTCATCGAGGGCGTCGCCGAAGCCACCGCGGCGATCACCAAGGTGTTCTCCGGCGCGTTGTCGGACTGGCTGGGCCGGCGCAAGCTGCTGGTGGCGATCGGCTATGGCCTGGCCGCGATCACCAAGCCGGTGTTCCCGCTGGCGGGCACGCTCGGCTGGGTGGTCGGCGCGCGTTTCGTGGACCGCATAGGCAAGGGTATCCGCGGCGCGCCGCGCGATGCGTTGATCGCGGACCTGGCGCCGGCCGAGCTGCGCGGCGCCTCGTTCGGCCTGCGCCAGTCGCTCGACACGGTGGGCGCGTTTCTCGGCCCCGCGCTGGCGATAGCGCTGATGTGGCTCGCCGCCGACAACATCCGGCTGGTGTTCTGGTTCGCGGTGCTGCCGGGCTTCGCGGCGTTCGCGCTGGTGGTGTTCGGCGTGCACGACGTGGCGAACAGCGGCGAAGGCAAGCGGCCGCGCTCGCCGCTGTCACGCGCCGAGCTGGCGCGCCTGCCGCCGCTGTACTGGGGCGTGGTGGCGATTGCCGCCGTGTTCACCCTGGCCCGTTTCAGCGAAGCGTTCCTGGTGCTGCGCGCGCAGGAACTGGGGCTGGGGCTGGTGCTGATCCCGCTGGTGCTGGTAGTGATGAACGTGGTGTACGCGCTGGCGTCCTACCCGGTCGGCGTGCTGGCCGACCGCTTCGACCGCGGCGCGCTGCTCGCACTGGGCGTGCTGGTGCTGGTGCTGTCGGACCTGGCGCTGGCGCTCGTCGGCGGCTTGGCCGGGCTGGCGTTGGGCGTGGTGTTGTGGGGCCTGCACATGGGCATGACCCAGGGCCTGCTGGCTGCCCTGGTCGCCGACGCCGCGCCGGCCAACTTGCGCGGCACCGCGTTCGGCATGTTCAACCTGGTCAGCGGACTGGCCCTGCTGGCGGCCAGCGTGGTGGCCGGCGAGTTGTGGGACGCGTTCGGCTCGCGCGCCACCTTCCTCGCCGGCGCCGGCTTCGCGGTGGTGGCGCTGTTCGCGCTGCTGCTGGTGGCGCAGCGGGTGCGCCGGAACCGGCCCGCACCCGGCTGA
PROTEIN sequence
Length: 395
RIPAGIWALGMVSLLMDTSSEMIHALLPVYLVSVLGASALAVGFIEGVAEATAAITKVFSGALSDWLGRRKLLVAIGYGLAAITKPVFPLAGTLGWVVGARFVDRIGKGIRGAPRDALIADLAPAELRGASFGLRQSLDTVGAFLGPALAIALMWLAADNIRLVFWFAVLPGFAAFALVVFGVHDVANSGEGKRPRSPLSRAELARLPPLYWGVVAIAAVFTLARFSEAFLVLRAQELGLGLVLIPLVLVVMNVVYALASYPVGVLADRFDRGALLALGVLVLVLSDLALALVGGLAGLALGVVLWGLHMGMTQGLLAALVADAAPANLRGTAFGMFNLVSGLALLAASVVAGELWDAFGSRATFLAGAGFAVVALFALLLVAQRVRRNRPAPG*