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scnpilot_solids2_trim150_scaffold_2735_2

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_69_103

partial RP 27 / 55 MC: 1 BSCG 30 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: comp(704..907)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPN0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 67.0
  • Bit_score: 138
  • Evalue 3.50e-30
Cold shock protein {ECO:0000313|EMBL:EIM01422.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 67.0
  • Bit_score: 138
  • Evalue 4.90e-30
cold shock protein similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 67.0
  • Bit_score: 130
  • Evalue 2.30e-28

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGCGTTTCGGTACGGTCAAATGGTTCAATGATGCCAAGGGCTTCGGTTTTATCGCGCCCGAGGATGGCGGGGAGGACGTGTTCGTCCATTTTTCGGCGATCAATTCCAAGGGCTTCCGCAGCCTGCAGGAAGGTCAGCGCGTGCAGTTCGAAGTGACCCAGGGCCCGAAAGGCGCCCAGGCATCGGCGGTCGAAGTCGCCTGA
PROTEIN sequence
Length: 68
MRFGTVKWFNDAKGFGFIAPEDGGEDVFVHFSAINSKGFRSLQEGQRVQFEVTQGPKGAQASAVEVA*