ggKbase home page

scnpilot_solids2_trim150_scaffold_2579_3

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_69_103

partial RP 27 / 55 MC: 1 BSCG 30 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: comp(2717..3187)

Top 3 Functional Annotations

Value Algorithm Source
Putative general secretion pathway related transmembrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMQ4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 139.0
  • Bit_score: 175
  • Evalue 3.50e-41
Putative general secretion pathway related transmembrane protein {ECO:0000313|EMBL:EIL88495.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 139.0
  • Bit_score: 175
  • Evalue 4.90e-41
putative general secretion pathway related transmembrane protein; K02452 general secretion pathway protein C similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 154.0
  • Bit_score: 89
  • Evalue 1.00e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
ATGTTGTCGGGACGATCGAAGTTTGCGCCAACGGCGGTCGCTTCCGCGTCGAAAGCCCTCGCGTTGTCGCTGCTGGGCTTCGTGCTGGCCTACTGGACCTGGGCGTGGTGCGGGCCGTCGCCGCTGTCGCGATCCGTGGAGATTTCCGAATCGCCTGCTCGCCTGGTGGCCGCCGGCAATTTGTTCGGCGGCATGGCGGGCGATGCCCCGGCCGATGCGCCGACCGGGCTGGCGGTGAGGTTACTGGGAGTCGTCGCCGGTCAACCGGCGGGTTCCGGCTACGCCCTGTTGCAGCTCGGCGCCGGGGAAACCCGGGTAGTGCGTGCGGGTGGGGATCTCGCGCCGGGCATACGCGTCGAGGAAGTGCTTCCACAACGAGTGATCCTGCAGCGCCACGGATCGCGCGAAACCCTGGCCTGGCCGAATCCTGCCCAGGCTCCCGCCACTGCGTCGGGCACCCCCGTCCGCTGA
PROTEIN sequence
Length: 157
MLSGRSKFAPTAVASASKALALSLLGFVLAYWTWAWCGPSPLSRSVEISESPARLVAAGNLFGGMAGDAPADAPTGLAVRLLGVVAGQPAGSGYALLQLGAGETRVVRAGGDLAPGIRVEEVLPQRVILQRHGSRETLAWPNPAQAPATASGTPVR*