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scnpilot_solids2_trim150_scaffold_5316_4

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_69_103

partial RP 27 / 55 MC: 1 BSCG 30 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: 3497..4177

Top 3 Functional Annotations

Value Algorithm Source
Large extracellular alpha-helical protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEX6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 227.0
  • Bit_score: 415
  • Evalue 2.90e-113
Large extracellular alpha-helical protein {ECO:0000313|EMBL:EIL98017.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 227.0
  • Bit_score: 415
  • Evalue 4.00e-113
large extracellular alpha-helical protein similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 227.0
  • Bit_score: 412
  • Evalue 7.60e-113

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGTCGCGTCGATCGTACGAGTGCCGTTCGCGCCGGGGGCTGTCGCGCGCGCTGATCGCCTTGCTGCTGGGCCTGCTGCTGGCGGCCTGCCATCGCGGTGCCGACAGCGGCAAGCCGGCGCTGCAGGGCGCGCCGGTCGCCAGTGCCTCCGCGCCGGCGCCGGCGAAGGCGGAGTTCGCGCTGGTCTCGGCCAGCTCGCAGACCAGCGACTCGCGCACCGCGCTGGTGCTGCGCTTCAACGCCGCACTGGCCTCGGCGCAGGCCTTCGACACGCAGGTGGCGGTGACCGGACCGAACGGCGAAGTGGTTGCCGGCAGCTGGAGCCTGGACGACGACGGCAAGACGCTGCGCTTCCCGTTCGTGCAGGCGAACACGCGCTACGTGGTGCAGCTGAAGGCCGGCCTGCTCGCTGCCGACGGCCGCACGCTGGGCCACGCGGTGAAGCACGACGTGTACTCCGGCAACCTGCCGGCGGCGGTCGGCTTCGCCTCGCACGGCAGCGTGCTGCCGGCGCGCGGCACGCGCGGCCTGCCGCTGGTGTCGATGAACGTGCACGACGCCGACGTGGAGTTCTTCCGCGTACGCGACGACGCGCTGTCGGACCTGTTCTGCAGCTACCCGCGCAACGGCCACCGCGACAGCTACGAGCTCGACCACGACGTCGCCTACTACAACAGCTGC
PROTEIN sequence
Length: 227
MSRRSYECRSRRGLSRALIALLLGLLLAACHRGADSGKPALQGAPVASASAPAPAKAEFALVSASSQTSDSRTALVLRFNAALASAQAFDTQVAVTGPNGEVVAGSWSLDDDGKTLRFPFVQANTRYVVQLKAGLLAADGRTLGHAVKHDVYSGNLPAAVGFASHGSVLPARGTRGLPLVSMNVHDADVEFFRVRDDALSDLFCSYPRNGHRDSYELDHDVAYYNSC