ggKbase home page

scnpilot_solids2_trim150_scaffold_6181_4

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_69_103

partial RP 27 / 55 MC: 1 BSCG 30 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: comp(3147..3530)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase DbpA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGP5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 127.0
  • Bit_score: 233
  • Evalue 8.70e-59
ATP-dependent RNA helicase DbpA {ECO:0000313|EMBL:EIL98636.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 127.0
  • Bit_score: 233
  • Evalue 1.20e-58
DNA/RNA helicase, superfamily II similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 127.0
  • Bit_score: 227
  • Evalue 2.60e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
GGCCGCGCCGGCGAGACGGGCCTGGCGATCACCCTGTGCACGCCGCGCGAGCGGCCGAAGGCGGCGAACATCGAGCAGATCCACGGCGCGCCGCTGCCGTGGCGCACGCTGAAAGTGGCGCCACCGCGCGGCAAGACCCTGCAGCTGGCGCCGATGAAGACGCTGGTGATCGACGCCGGCCGGCAGGACAAGCTGCGCCCCGGCGACATCCTCGGCGCGCTCACCGGCGAGGCCGGGCTGCAGGCGCTGGACATCGGCAAGATCGACGTGTTCGCCACCCGCGCCTACGTGGCGATCAGCCGCGCGCTGGCGAACCAGGCGCTGGAGCGCCTGCGCGCGGGCAAGATCAAGGGCCGCAACTTCCGCGTGCGTCCGCTAGGCTAG
PROTEIN sequence
Length: 128
GRAGETGLAITLCTPRERPKAANIEQIHGAPLPWRTLKVAPPRGKTLQLAPMKTLVIDAGRQDKLRPGDILGALTGEAGLQALDIGKIDVFATRAYVAISRALANQALERLRAGKIKGRNFRVRPLG*