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scnpilot_solids2_trim150_scaffold_6206_3

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_69_103

partial RP 27 / 55 MC: 1 BSCG 30 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: comp(1688..2341)

Top 3 Functional Annotations

Value Algorithm Source
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 217.0
  • Bit_score: 415
  • Evalue 6.60e-113
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBL5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 217.0
  • Bit_score: 415
  • Evalue 4.70e-113
  • rbh
chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 217.0
  • Bit_score: 412
  • Evalue 9.60e-113

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGATGCCGGTGGTGACGGTCGACCGCCGGGCCACGCCCACGCTGCCCGAGGCCATGCCCGGTTTCGAACACCTGCGCCGGTTCTGGGATCCGACCCAGGGCCGCATGGTGGTGAAGGTGCTGCCGGGCGAGTTCTACGTGAGCGGCAGCGACGAGCTGGTCAGCACCGTGCTCGGCTCGTGCGTGTCGGCCTGCATCCACGACGCGGAGCGCGGCGTCGGCGGCATGAACCATTTCATGCTGCCCGAGCCGATGGGCGAGCGCGACAGCTGGTCGTCGGCCGTCGGCCGCGCGGCGCGCTACGGCAGCGACGCGATGGAGCAGCTGATCAACGCGATCCTGAAGGCGGGCGGCCAGCGCGCGAACCTGCAGGTGAAGGTATTCGGCGGCGGCCGCGTGCTGGCCCAGCTGAGCGACGTGGGCCGGCGCAACATCGACTTCGTGCACCGCTACATCGAGGCCGAGCGGCTGCAGCTGGCGGCGGAGGACCTCGGTGACGTCTACCCGCGCCAGGTGCAGTTCTTCCCGCACAGCGGCCGCGTCCGCGTGCGCCAGCTGCGTCGCAGCGACGACGTGGCGCTGGTGGCCGGCGAGAGCGGCTACCTCAAGCGTTTGGCAAACGATCCGATAAAGGGTGAGGTCGAGCTGTTCTAG
PROTEIN sequence
Length: 218
MMPVVTVDRRATPTLPEAMPGFEHLRRFWDPTQGRMVVKVLPGEFYVSGSDELVSTVLGSCVSACIHDAERGVGGMNHFMLPEPMGERDSWSSAVGRAARYGSDAMEQLINAILKAGGQRANLQVKVFGGGRVLAQLSDVGRRNIDFVHRYIEAERLQLAAEDLGDVYPRQVQFFPHSGRVRVRQLRRSDDVALVAGESGYLKRLANDPIKGEVELF*