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scnpilot_solids2_trim150_scaffold_3866_4

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_69_103

partial RP 27 / 55 MC: 1 BSCG 30 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: comp(2209..2709)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreB n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRC5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 165.0
  • Bit_score: 308
  • Evalue 3.60e-81
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 165.0
  • Bit_score: 308
  • Evalue 5.10e-81
transcription elongation factor GreB similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 165.0
  • Bit_score: 301
  • Evalue 1.40e-79

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 501
ATGAGCCGCTGGCGGCCGCCCTCGCCCGGCTCCACCGCGATCATCACCCGCGAGGGCTTCGAGCGGCTGAAGGCCGAGCTCGACCACCTGTGGCACGTGCTGCGCCCGGAGGTGGTGAAGGCGCTGGCCGCCGCGGCCGCGGAAGGCGACCGCTCGGAGAACGCCGAATACACCTACCGCAAGAAGCAGCTCGGCGAAATCGACCGCCGCGCCCGCTACCTCAGCAAGCGCATCCCCGCGCTCAAGGTGGCCGAAGGCGTGCCGGGCGACCGCGACGCGGTGTTCTTCGGCGCCCGCATCGAGCTGGAGAACGTCGCCACCGGCGAGATCCACCGCTACCGCATCGTCGGCCCCGACGAGACCGACGCGAAACGCGGCTGGATCAGCATCGACTCGCCGCTGGCGCGGGCGGTGCTGAAGAAGCGCGTCGACGACGAATTCAGCGCCGAGCTGCCGGGCGGCATTACGTGGTTCGCCGTGCTGATGGTGGATTACGGCTAA
PROTEIN sequence
Length: 167
MSRWRPPSPGSTAIITREGFERLKAELDHLWHVLRPEVVKALAAAAAEGDRSENAEYTYRKKQLGEIDRRARYLSKRIPALKVAEGVPGDRDAVFFGARIELENVATGEIHRYRIVGPDETDAKRGWISIDSPLARAVLKKRVDDEFSAELPGGITWFAVLMVDYG*