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scnpilot_solids2_trim150_scaffold_3785_3

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_69_103

partial RP 27 / 55 MC: 1 BSCG 30 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: comp(1074..2048)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 323.0
  • Bit_score: 604
  • Evalue 2.60e-170
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 323.0
  • Bit_score: 604
  • Evalue 1.10e-169
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NBA3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 323.0
  • Bit_score: 604
  • Evalue 8.20e-170

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGACCACGATCCGGCACGAGGCGGAGGTGCCGCTGGCCGCGGCCGGACGCAGGTTCGACCAGGCGCTGGCCGGGATGTTCCCCGACTATTCGCGCTCGCGGCTCAGCGGCTGGATCAAGTCCGGCGCGGTGACCCTGGACGGCGCGCCCGCGCCGCCGCGGCAGCTGCTGCGCGGTGGCGAGCGGGTGTGCCTGGAGGTCGAGCTGGAAGACGAGGTGTCCAGCGCGCCGGAGGACATCGCGCTGGCTGTCGTGCACGAGGACGCGCACCTGCTGGTGCTGGACAAGCCGGCCGGGCTGGTGGTCCATCCCGGCGCCGGCAACCCGGCCGGCACCTTGCTGAACGCGCTGCTGCACCATGATCCGCGGCTGGCCGAACTGCCGCGCGCCGGCATCGTGCACCGGCTGGACAAGGACACCTCCGGCCTGATGGTGGTGGCGAAGACGCTGCCGGCGTACACCGCGCTGGTCGACCTGCTGTCGCGGCACGAGGTGGAACGCCAGTACGAGGCGGTGGTGCTGGGCACGCTGGTGGCCGGCGGCACCGTGGACGCGCCGATCGGCCGCAGCATGGGCGACCGCCTGCGCCAGGCGGTGCGCGACGAGGAAGACGGCAAGCGCGCGGTGACCCACTACCGCGTGCGCGAACGTTTCCGCGCGCACAGCCTGCTGCAGTGCCAATTGGAGACCGGCCGTACCCACCAGATCCGCGTGCATCTGGCGCATATCGGCCACCCGCTGGTCGGCGACCCGCTGTACGGCGGGGGGCTGAAACTGTCCAAGGGCGCCAGCGCGGAACTGGCCGCCACCCTGCGCGGTTTCCGGCGGCAGGCGCTGCATGCCGAGAAGCTCTCGTTCATCCATCCGGCCACCGGCGAGGCGATGTCGTTCGACGCGCAGCGGCCGGCCGACCAGCAGCAACTGATCGAGGCGTTGCGCACGGACCTGGCCGAGCACGGTTCCGACCACGACTGA
PROTEIN sequence
Length: 325
MTTIRHEAEVPLAAAGRRFDQALAGMFPDYSRSRLSGWIKSGAVTLDGAPAPPRQLLRGGERVCLEVELEDEVSSAPEDIALAVVHEDAHLLVLDKPAGLVVHPGAGNPAGTLLNALLHHDPRLAELPRAGIVHRLDKDTSGLMVVAKTLPAYTALVDLLSRHEVERQYEAVVLGTLVAGGTVDAPIGRSMGDRLRQAVRDEEDGKRAVTHYRVRERFRAHSLLQCQLETGRTHQIRVHLAHIGHPLVGDPLYGGGLKLSKGASAELAATLRGFRRQALHAEKLSFIHPATGEAMSFDAQRPADQQQLIEALRTDLAEHGSDHD*