ggKbase home page

scnpilot_solids2_trim150_scaffold_13882_3

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_69_103

partial RP 27 / 55 MC: 1 BSCG 30 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: 807..1637

Top 3 Functional Annotations

Value Algorithm Source
shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 276.0
  • Bit_score: 497
  • Evalue 3.80e-138
  • rbh
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 276.0
  • Bit_score: 497
  • Evalue 1.70e-137
Shikimate dehydrogenase n=2 Tax=Rhodanobacter denitrificans RepID=M4NU95_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 276.0
  • Bit_score: 497
  • Evalue 1.20e-137
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 831
ATGCCAGCCGCCCAGTTCGCCGTGTTCGGCCATCCGATTGGCCATTCGCTGTCGCCGCCGATCCATCAGGCGTTCGCGCGGCAGTTCGGCATCGCGCTGGAATACCGCGCGATCGACGTGGAGCCGGCCGGTTTTGCCGCGGCGGTGCGGCGCTTCTTCGCCGACGGCGGCCGCGGCGCCAACGTCACCCTGCCGCACAAGGCCGCCGCCTTCGCGCTGGCGGACGAACGCAGCGCGGCGGCCACGCGCGCCGGCAGCGCCAACGTGCTGACTCCGCTGGCCGACGGCCGGCTGGCCGCGCACAACACCGACGGCGACGGTCTGGTGCGCGACCTCACCGAGCGTCACCACGTGGACCTGCGCGGCCACACCGCCCTGCTGCTGGGCGCCGGCGGCGCCGCGCACGGCGTGGCGTGGAGCCTGCTGGACGCCGGCGTAGAGACGCTGACCATCGTCAGCCGCAGTGCCGAGCGTGCCGATGCGCTGGCCGACGCGATCGGCGAACCGGCGCGCGCGCATACCCGCTACTGGTCCGACCTGGCCGACATCGGCAGCTACGACCTGATCGTCAACGCCACCTCGGCCGGCGTGCTTGGCGAGTCGCTGCAGCTGCCGCCTTCGCTGATCGGCGCACGCGCGCTGTGCTACGACCTCTCCTATGGAGCCGCCGCCAGCGGCTTCCTGAGCTGGGCGACGGCCGCAGGTGCGCGCTACGCGTTCGACGGCCTCGGCATGCTGGTGGAAACCGCCGCCGATGCATTCGAGCTGTGGCATGGCCAGCGGCCGGATACCGAGCCGGTGTACCAGGCGTTGCGTCGGCAGTCCGCATGA
PROTEIN sequence
Length: 277
MPAAQFAVFGHPIGHSLSPPIHQAFARQFGIALEYRAIDVEPAGFAAAVRRFFADGGRGANVTLPHKAAAFALADERSAAATRAGSANVLTPLADGRLAAHNTDGDGLVRDLTERHHVDLRGHTALLLGAGGAAHGVAWSLLDAGVETLTIVSRSAERADALADAIGEPARAHTRYWSDLADIGSYDLIVNATSAGVLGESLQLPPSLIGARALCYDLSYGAAASGFLSWATAAGARYAFDGLGMLVETAADAFELWHGQRPDTEPVYQALRRQSA*