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scnpilot_solids2_trim150_scaffold_62_75

Organism: SCNPILOT_SOLID2_TRIM150_Phage_12

RP 3 / 55 BSCG 3 / 51 ASCG 3 / 38
Location: comp(76991..80581)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 999.99
  • Bit_score: 1805
  • Evalue 0.0
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 999.99
  • Bit_score: 1805
  • Evalue 0.0
  • rbh
transcription-repair coupling factor n=1 Tax=Curvibacter lanceolatus RepID=UPI0003733133 similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 999.99
  • Bit_score: 1823
  • Evalue 0.0
  • rbh

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Taxonomy

Polaromonas sp. JS666 → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3591
ATGCAACTCCCTACCCTCACCGCCGGCAAGCGCTTCACCCTGCACCGCTGCGCCGGTTCCAGCGACGCCTTGCTGCTCTCGCGCCTGGCGCAGAGCGTGCGCGCCGACCGGCGCATCGCCGCCATCGTCTGCGCCGACGCCTCGGACGCACGCCGCCTGCAGGATGAAATCGCCTTCTTTGCCCCCGAGCTGCGCTGCGCGCTGTTCCCGGACTGGGAGACGCTGCCCTACGATCATTTCTCGCCGCACCAGGATCTGATCAGCGAGCGCCTCTCCACGCTCTGGCGCATCCGCGAGGCGGAAGCGGACGTGGTGCTGGTGCCGGCGACCACCGCGCTCTACCGGCTGGCGCCACCCTCCTTCCTCGCGGGCTACACCTTCCATTTCAAGACCGGGCAGAGGCTCAACGAAGCCAAGCTGCGCGCGCAGCTCACGCTGGCGGGCTACCAGCACGTGGGGCAGGTGGTGGGCCACGGCGAATACGCGGTGCGCGGCGGACTGATCGACCTCTACCCCATGGGCTCGCCGCAGCCGCTGCGCGTCGATCTGTTCGACGACGAGATCGACTCCATCCGCACCTTCGACCCCGACACGCAGCGCAGCCTCTACCCCGTGCCCGAGGTGCGCCTGCTGCCCGGACGCGAGTTTCCGATGGACGAGGAGGCACGCACGCGCTTTCGCAACCGCTGGCGCGAGCTGCTGGAGGGCGACCCGACCAAGAGCCGCATCTACAAGGACATGGGCGCGGGCCTGGCGACCGCGGGCATTGAATACTACCTGCCGCTGTTCTTCGAGCAGACCGCCACGGTCTTTGATTACCTGGGCGATGCCGCCACGCTGGTGCTGCATGGCGACCTGGAGGCGGCGTTCCACCGCTTCTGGCAGGACACGCGCGAGCGCCACCGCTTGCTGGCGGGCGACCCCGAGCACCCCGCGCTGCCGCCCGAGGCGCTGTTCCTCAGCGCCGAGCAGTTCTACGCCAGCGCCAGGCCGCACCCGCAGCTATCGCTCAGGCAGGGTTCACTCCCTCGCCCCTCCGGGGAGAGGGTTGGGGAGAGGGGCGCAGAAGGACAGGCTGCGCCCGAGACAGCCCCCACCCCTGCCCTCCCCCAGGGGGGGAGGGTGGAACCGGGTGCGCCCCCGCAGAGCGGGAGGGTGGAATTCACGGCGCTGCCGGATCTGACGGCCGTGCGCGGCGCGGAAGACCCGATTGCCAAGCTGCAGGCCCACATCCAGCGCACGCCGCACCGCGTGCTGCTGCTGGCCGAGAGTGACGGCCGGCGCGAGAGCCTGCTGGACTTCCTGCGCGCCAGCCACCTGAACCCGCCGGCCTTCGATTCGCTGGAAGAATTTCTCGGCGCGCAGGGCGAGCGCGTGGGCATCGCCACCTCGGTGCTCGCCAGCGGCTTCGCCTGGGTGGAAGAAGGCATCGACTTCGTCACCGAAACCGAACTGTTTGCAGCCGCAGGCGGCACCGTGCGCCGGCGCAGGAAGCAGGAGCAGACCAGCGACCTGGAATCCATGATCAAGGACCTCGCCGAGCTCCAGATCGGCGACCCTGTCGTCCATGCGCAGCACGGCATCGGCCGCTACCGGGGCCTGGTCAACATGGACATGGGGCAGAAGAACCCCGACGGCACGCCTGCGCTGCAGGAATTCCTGCACCTGGAATACGCCGACAAGGCCACGCTCTATGTGCCGGTAAGCCAGCTGCAGCAGATCAGCCGCTACAGCGGCATCGCGGGCGACGAAGCGCCGCTGCACAAGCTCGGCGGCAACCAGTGGGAAAAGGCCAAGAGAAAAGCCGCCGAGCAGGTGCGCGACAGCGCCGCCGAGCTGCTCAACATCTACGCCCGCCGCGCCGCGCGCGAGGGCTTTGCCTTCCGCTTCTCGCCACAGGATTACGAAGCCTTCGTGAGCGACTTCGGCTTCGAGGAAACCGCCGACCAGAACGCCGCGATCCACGCCGTCATCCAGGACATGATCAGCCCGCGCCCCATGGATCGCCTGGTCTGCGGCGACGTGGGCTTTGGCAAGACCGAAGTCGCGCTGCGCGCCGCCTTCATCGCCGTCACCGGCGGCAAGCAGGTGGCGCTGCTCGCGCCGACCACGCTGCTGGCCGAGCAGCATTACCAGACGCTGGTCGATCGCTTCGCGCGCTGGCCGGTGAAGGTCGCGCAGGTCAGCCGCTTCGCCTCGGGCAAGGAAACCACTGCCGCGCTCAAGGGCCTGGCCGAAGGCGCGGTGGACATCGTCGTCGGCACGCACAAGCTGCTCTCGCAGTCCACCAAGTTCAAGAACCTGGGCCTCTTGATCATCGACGAAGAGCACCGTTTCGGCGTGCGCCACAAGGAGGCGATGAAAGCCATGCGCGCCGAAGTGGATGTGCTCACGCTGACCGCCACGCCGATTCCGCGCACCATGGGCATGGCGCTGGAAGGCCTGCGCGATCTCTCGGTGATCGCCACCGCGCCGCAGCGGCGTCTGGCGATCAAGACCTTTCTGCGCGAGGAAAACCAGGGCGTGATCCGCGAAGCGGTGCTGCGCGAATTGAAGCGCGGCGGGCAGGTGTACTTCCTGCACAACGAGGTGGAAACGATAGAGCACCGGCGCGAGGCGCTCGCCGCCATCCTGCCCGAGGCGCGCATCGCCGTGGCCCACGGCCAGATGCCGGAGCGGCAGCTGGAGCACGTGATGCGCGATTTCGTGGCCCAGCGCACCAATGTGCTGCTGTGCTCGACCATCATCGAAACCGGCATCGACGTGCCGACGGCCAATACCATCCTCATCAGCCGCGCCGACAAGTTCGGCCTGGCGCAGCTGCACCAGCTGCGCGGTCGCGTGGGCCGCAGCCACCACCAGGCCTACGCCTACCTCATGGTGCCGGATGTGCACGGACTCAAGGGCCACGCGGCGCAGCGCCTGGAGGCGATCCAGCAGATGGAGGAACTGGGCAGCGGCTTTTACCTCGCGATGCACGACCTGGAAATCCGCGGCGCCGGCGAGGTGCTGGGCGAGAACCAGTCAGGCAACATGGTCGAGGTGGGGTTCCAGCTCTACAACGAGATGCTGGCCGAGGCCGTGCGCTGCCTCAAGGCCGGCAAGGAGCCCGACCTGCTCGCACCGATGCAGGCGACGACCGACATCAATCTGCACGCCCCGGCGCTGCTGCCTTCGGATTACTGCGCCGACGTGCAGACGCGCCTGTCGCTCTACAAAAAACTGGCCACCGCGCATACCAGCGCGCAGATCGACACGCTGCTGGAAGAAATCGTCGACCGCTTCGGCAAGCTGCCGGCCCAGGCGCAGACCCTGATCGACACCCACCGCCTGCGCGTACTGTGCGAACCGTACGGCGTGACCAAGGTGGACGCAGCCCCCGGCGTGATCAGCATCAGCTTCACCCCGCAGCCGCCCATCGACCCCATGGCCATCATCCGGCTGGTGCAGAAAAACCGCGACATCAAGCTGGCGGGCAACGAGAAACTGCGGATTGAGCGCGCGCTACCCGAGCCGAACCTGCGCGCGCAGATGGTGCGTGACCTGCTGCGCAGCCTGGGTCAGCCAGAACGCGAAGCCGTGGCGGCCTGA
PROTEIN sequence
Length: 1197
MQLPTLTAGKRFTLHRCAGSSDALLLSRLAQSVRADRRIAAIVCADASDARRLQDEIAFFAPELRCALFPDWETLPYDHFSPHQDLISERLSTLWRIREAEADVVLVPATTALYRLAPPSFLAGYTFHFKTGQRLNEAKLRAQLTLAGYQHVGQVVGHGEYAVRGGLIDLYPMGSPQPLRVDLFDDEIDSIRTFDPDTQRSLYPVPEVRLLPGREFPMDEEARTRFRNRWRELLEGDPTKSRIYKDMGAGLATAGIEYYLPLFFEQTATVFDYLGDAATLVLHGDLEAAFHRFWQDTRERHRLLAGDPEHPALPPEALFLSAEQFYASARPHPQLSLRQGSLPRPSGERVGERGAEGQAAPETAPTPALPQGGRVEPGAPPQSGRVEFTALPDLTAVRGAEDPIAKLQAHIQRTPHRVLLLAESDGRRESLLDFLRASHLNPPAFDSLEEFLGAQGERVGIATSVLASGFAWVEEGIDFVTETELFAAAGGTVRRRRKQEQTSDLESMIKDLAELQIGDPVVHAQHGIGRYRGLVNMDMGQKNPDGTPALQEFLHLEYADKATLYVPVSQLQQISRYSGIAGDEAPLHKLGGNQWEKAKRKAAEQVRDSAAELLNIYARRAAREGFAFRFSPQDYEAFVSDFGFEETADQNAAIHAVIQDMISPRPMDRLVCGDVGFGKTEVALRAAFIAVTGGKQVALLAPTTLLAEQHYQTLVDRFARWPVKVAQVSRFASGKETTAALKGLAEGAVDIVVGTHKLLSQSTKFKNLGLLIIDEEHRFGVRHKEAMKAMRAEVDVLTLTATPIPRTMGMALEGLRDLSVIATAPQRRLAIKTFLREENQGVIREAVLRELKRGGQVYFLHNEVETIEHRREALAAILPEARIAVAHGQMPERQLEHVMRDFVAQRTNVLLCSTIIETGIDVPTANTILISRADKFGLAQLHQLRGRVGRSHHQAYAYLMVPDVHGLKGHAAQRLEAIQQMEELGSGFYLAMHDLEIRGAGEVLGENQSGNMVEVGFQLYNEMLAEAVRCLKAGKEPDLLAPMQATTDINLHAPALLPSDYCADVQTRLSLYKKLATAHTSAQIDTLLEEIVDRFGKLPAQAQTLIDTHRLRVLCEPYGVTKVDAAPGVISISFTPQPPIDPMAIIRLVQKNRDIKLAGNEKLRIERALPEPNLRAQMVRDLLRSLGQPEREAVAA*