ggKbase home page

scnpilot_solids2_trim150_scaffold_27144_1

Organism: SCNPILOT_SOLID2_TRIM150_Plasmid_8

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(2..1075)

Top 3 Functional Annotations

Value Algorithm Source
F pilus assembly protein TraB n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B984 similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 359.0
  • Bit_score: 366
  • Evalue 4.10e-98
  • rbh
F pilus assembly protein TraB {ECO:0000313|EMBL:EER20877.1}; TaxID=444612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group.;" source="Rickettsia endosymbiont of Ixodes scapularis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.8
  • Coverage: 332.0
  • Bit_score: 156
  • Evalue 6.90e-35
F pilus assembly protein TraB; K12065 conjugal transfer pilus assembly protein TraB similarity KEGG
DB: KEGG
  • Identity: 26.5
  • Coverage: 358.0
  • Bit_score: 144
  • Evalue 4.70e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rickettsia endosymbiont of Ixodes scapularis → Rickettsia → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1074
AGGGTAATCAGCATGTATTTTCCAGACAAAATAAAGGAAATAGTGGATAAACTTAGGGGAGATTCTTCCCCAGTTTTTTCTCCGAGTCATGTCCGTAAAAAACAACTCTTAATGTCGAGCGGAGTGGTCGCTGGTCTTGTTTTGGGGGTAGGAGTAATATTTTTGTGGCGATCTGAATCAGCCCGCTCGTCGGAAAAGCAAGAAAAGTCAGTGAGTGTGACTCCTAAAACAATTGCCACTCCTTTAGAAAGTGTGAATGAGAAAGAAATCTGGGTCAGCAGAGTTGAGCACCACGCAAAGGAAGTGGAAGAAAAAGCCGCAAAAGTTATCAAAGAGAATGAACTCTTAGAAAAAAGAATAGATATTCTAGAAGAGTTGTTAAAACAGCAAAGCATTGACCAAAGAATTGCTGACGAAGAAGCAGCAAAGAGCATTCAAATAGAACCGGAACAGTCGGGGCTGAGAACTAATTTAAATCAAAACTCTTTATCTAACCAATTTCCTGCCTTTAATGAGTCTGAGGGTGCCAATCCTTCGCTTTCCACAACTGGAAATACCTCAGAAAAAATAGGTCATCTTAGTCGATCCAATATGTCAATCACGCCTTTTAAAACAGTCGATACCTATTTACCCGCTACGACAACCTGTAAAGCCGTCATGACAAGCGGGGTAGTGGCCCCAGCCGCTCCTGAATCTAAAAGTAATCCAAAACCAGTTACCTTACGGATTGTTGATGATGGAAATTTACCGAGAGGATTTACCAGCCGCGTTCAGGGCGCCGAGATCAATGCTGCTTGCCATGGGGATATTTCAACAGAGCGGGTTGAGTGCCGATTAGTCAGTATGACCTGGGTTGAACCGAATGGAGTGGTTGTTGAACGGAATATTGAAGGCTGGATTTATGGAGAGGATGGAAGCGAGGGCCTGAGAGGGAAAGTCGTTGATCGGTCAGGAGATGTGGCGCGAGAAGCTTATTTTGCAGGAATTTTATCGGGATTCGCCAATTTCTTTAAGTTTGAGGCTCAATCAAGTGTTTACCCGGCAAGTCCGTTCGGTGTGACTAATGCGTTAAGT
PROTEIN sequence
Length: 358
RVISMYFPDKIKEIVDKLRGDSSPVFSPSHVRKKQLLMSSGVVAGLVLGVGVIFLWRSESARSSEKQEKSVSVTPKTIATPLESVNEKEIWVSRVEHHAKEVEEKAAKVIKENELLEKRIDILEELLKQQSIDQRIADEEAAKSIQIEPEQSGLRTNLNQNSLSNQFPAFNESEGANPSLSTTGNTSEKIGHLSRSNMSITPFKTVDTYLPATTTCKAVMTSGVVAPAAPESKSNPKPVTLRIVDDGNLPRGFTSRVQGAEINAACHGDISTERVECRLVSMTWVEPNGVVVERNIEGWIYGEDGSEGLRGKVVDRSGDVAREAYFAGILSGFANFFKFEAQSSVYPASPFGVTNALS